Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 149 1e-30 seq5 134 3e-26 >seq2 Length=3515922 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| |||||||| | | || | || || ||||| || || || ||||| || || | Sbjct 2794236 TTCCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTG 2794295 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | || || || | |||||| |||||||| || | || ||| ||||| |||| Sbjct 2794296 AGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTG 2794355 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| ||||||||||| ||||| | ||||||| || || || |||| ||||| | Sbjct 2794356 GGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGA 2794415 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | ||||| || || || || || || |||||||| ||||||||| Sbjct 2794416 CCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465 Score = 147 bits (162), Expect = 4e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || || | |||||||| | || ||||| || |||||||| |||||| Sbjct 2794692 TTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGC 2794751 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || | ||||| || | ||| || |||||||| ||||| | || || || || | Sbjct 2794752 TCAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAG 2794811 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411 |||||||||||||||| || ||||| |||||| ||||||||||| ||| || || Sbjct 2794812 GAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTC-GCTCGACTCA 2794870 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||||||||| || || || | ||||||||||| |||||||| Sbjct 2794871 ACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || | || ||||| || | ||| ||| || || ||||| || ||||| Sbjct 2794010 CCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 2794069 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || ||||| || ||||||||||| Sbjct 2794070 AGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGG 2794129 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||||| ||||| || |||||||||| || ||| Sbjct 2794130 ATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACT 2794189 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| || || || || ||||| | |||||||| || || |||||| Sbjct 2794190 TCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237 Score = 140 bits (154), Expect = 6e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || ||||| || | || | || || || || ||||| |||||||| || |||| Sbjct 2794464 TTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGG 2794523 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | || ||||| | ||||| ||||| || || || | ||| || || || | Sbjct 2794524 AGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGG 2794583 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411 | ||||||||||||||||||||||| ||||||| |||||||| || ||| || || Sbjct 2794584 GGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTATC-GCTCGACTCA 2794642 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | || ||||| || || || || ||||| || || || |||||| Sbjct 2794643 ACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693 >seq5 Length=2445035 Score = 134 bits (148), Expect = 3e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || ||||| | ||||| |||||||| || |||| || ||||| ||||| ||||| ||| Sbjct 1847830 CCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCAGGTGGGATGCCCTCC 1847771 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| ||||| | ||||| ||||| ||||||| ||||| || || | |||| Sbjct 1847770 TTGTCTTGGATCTTGGATTTGACATTGTCGATTGTGTCTGAGGATTCGACCTCGAGGGTG 1847711 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 ||||| || |||||||||||||||||||| Sbjct 1847710 ATGGTCTTGCCCGTGAGGGTCTTGACGAA 1847682 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 224448 TGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAA 224507 |||| || || | || ||||| || | |||| || || ||| ||||| ||||||| Sbjct 1122034 TGTGTGAGATGATAACGACACCACCCTCAAATGCCTTGAGTGCGTTGGAAAGGGCGCCAA 1121975 Query 224508 GCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCC 224567 |||| ||||| || ||| |||| |||||||| |||| || ||| | ||| |||| ||||| Sbjct 1121974 GCGAGTCGCGATCGAGGTAGTTGGTCGGCTCGTCCAAGACGATCAAGTGAGGGCGCTGCC 1121915 Query 224568 ACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCG 224627 | | ||| | | || | ||| || ||| ||||| || || ||||| || |||| Sbjct 1121914 ATGTGCAAGCAGCGAGGACAACCTTGACGCGCTGGCCGCCGGAAAGACCGCGCATGCGCG 1121855 Query 224628 AGTG 224631 |||| Sbjct 1121854 AGTG 1121851 Score = 93.3 bits (102), Expect = 8e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573 |||||| ||||| || ||||||||| |||||| || ||||||||||| || || || || Sbjct 1120926 GAGCCAGGCCACATTCTTGACGTCCAAGTGGTTCGTGGGTTCGTCCAGGAGGAGAATATC 1120867 Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633 || || || | ||| || | ||| | || |||||| |||||||| ||||| ||||| Sbjct 1120866 AGGATTCTCGAACACGGCACGAGCGAGGGCCAACTTCATCTTCCAGCCACCGGAGAGGGA 1120807 Query 225634 G 225634 | Sbjct 1120806 G 1120806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622227195800