Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 1e-30
seq5 134 3e-26
>seq2
Length=3515922
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| |||||||| | | || | || || ||||| || || || ||||| || || |
Sbjct 2794236 TTCCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTG 2794295
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
|||| || | || || || | |||||| |||||||| || | || ||| ||||| ||||
Sbjct 2794296 AGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTG 2794355
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| ||||| ||||||||||| ||||| | ||||||| || || || |||| ||||| |
Sbjct 2794356 GGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGA 2794415
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
| || | ||||| || || || || || || |||||||| |||||||||
Sbjct 2794416 CCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465
Score = 147 bits (162), Expect = 4e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || || || || | |||||||| | || ||||| || |||||||| ||||||
Sbjct 2794692 TTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGC 2794751
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || | ||||| || | ||| || |||||||| ||||| | || || || || |
Sbjct 2794752 TCAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAG 2794811
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411
|||||||||||||||| || ||||| |||||| ||||||||||| ||| || ||
Sbjct 2794812 GAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTC-GCTCGACTCA 2794870
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | ||||||||| || || || | ||||||||||| ||||||||
Sbjct 2794871 ACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || | || ||||| || | ||| ||| || || ||||| || |||||
Sbjct 2794010 CCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 2794069
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || ||||| || |||||||||||
Sbjct 2794070 AGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGG 2794129
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| ||||||| ||||| || |||||||||| || |||
Sbjct 2794130 ATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACT 2794189
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| || || || || ||||| | |||||||| || || ||||||
Sbjct 2794190 TCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Score = 140 bits (154), Expect = 6e-28
Identities = 171/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || ||||| || | || | || || || || ||||| |||||||| || ||||
Sbjct 2794464 TTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGG 2794523
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
|||| || | || ||||| | ||||| ||||| || || || | ||| || || || |
Sbjct 2794524 AGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGG 2794583
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411
| ||||||||||||||||||||||| ||||||| |||||||| || ||| || ||
Sbjct 2794584 GGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTATC-GCTCGACTCA 2794642
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | || ||||| || || || || ||||| || || || ||||||
Sbjct 2794643 ACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
>seq5
Length=2445035
Score = 134 bits (148), Expect = 3e-26
Identities = 119/149 (80%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|| ||||| | ||||| |||||||| || |||| || ||||| ||||| ||||| |||
Sbjct 1847830 CCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCAGGTGGGATGCCCTCC 1847771
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| | ||||| ||||| ||||||| ||||| || || | ||||
Sbjct 1847770 TTGTCTTGGATCTTGGATTTGACATTGTCGATTGTGTCTGAGGATTCGACCTCGAGGGTG 1847711
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
||||| || ||||||||||||||||||||
Sbjct 1847710 ATGGTCTTGCCCGTGAGGGTCTTGACGAA 1847682
Score = 98.7 bits (108), Expect = 2e-15
Identities = 132/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 224448 TGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAA 224507
|||| || || | || ||||| || | |||| || || ||| ||||| |||||||
Sbjct 1122034 TGTGTGAGATGATAACGACACCACCCTCAAATGCCTTGAGTGCGTTGGAAAGGGCGCCAA 1121975
Query 224508 GCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCC 224567
|||| ||||| || ||| |||| |||||||| |||| || ||| | ||| |||| |||||
Sbjct 1121974 GCGAGTCGCGATCGAGGTAGTTGGTCGGCTCGTCCAAGACGATCAAGTGAGGGCGCTGCC 1121915
Query 224568 ACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCG 224627
| | ||| | | || | ||| || ||| ||||| || || ||||| || ||||
Sbjct 1121914 ATGTGCAAGCAGCGAGGACAACCTTGACGCGCTGGCCGCCGGAAAGACCGCGCATGCGCG 1121855
Query 224628 AGTG 224631
||||
Sbjct 1121854 AGTG 1121851
Score = 93.3 bits (102), Expect = 8e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573
|||||| ||||| || ||||||||| |||||| || ||||||||||| || || || ||
Sbjct 1120926 GAGCCAGGCCACATTCTTGACGTCCAAGTGGTTCGTGGGTTCGTCCAGGAGGAGAATATC 1120867
Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633
|| || || | ||| || | ||| | || |||||| |||||||| ||||| |||||
Sbjct 1120866 AGGATTCTCGAACACGGCACGAGCGAGGGCCAACTTCATCTTCCAGCCACCGGAGAGGGA 1120807
Query 225634 G 225634
|
Sbjct 1120806 G 1120806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622227195800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |