Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2 125 6e-24 >seq2 Length=3515922 Score = 125 bits (138), Expect = 6e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||||||||||| || || ||| || || |||||||| Sbjct 2794724 GTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCATCCTCGAGCTGTTTACCG 2794783 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| || || |||||||||||||| ||||| ||||| || Sbjct 2794784 GCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTG 2794843 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| | || || || || | ||| | || |||||||||| ||| Sbjct 2794844 ACATTGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTC 2794903 Query 114366 TTTACAAAAATCTGCATGG 114384 || || || |||||||||| Sbjct 2794904 TTGACGAAGATCTGCATGG 2794922 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| ||||||| || ||||| | || || || ||||||||||| ||| Sbjct 2794009 ACCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 2794068 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || || || ||| ||||| || || |||||| |||| || | ||| ||||| || || Sbjct 2794069 CAGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGG 2794128 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || ||||| |||||| ||| | | |||| |||||| | | ||||| Sbjct 2794129 GATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGAC 2794188 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||| ||||| |||| ||| || ||||| || ||||| Sbjct 2794189 TTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || ||||| | ||| | ||| | || ||||| || ||||||||||| || Sbjct 2794235 ATTCCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCT 2794294 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || || || || || || || ||| |||| | || || |||||||| Sbjct 2794295 GAGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGT 2794354 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | |||| || || | |||||| Sbjct 2794355 GGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCG 2794414 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||||||||||||||| || || |||||||| Sbjct 2794415 ACCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCAT 2794464 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || | ||| | || |||||||| || |||||||| ||| Sbjct 2794463 ATTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCG 2794522 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||||| || || || |||| ||||| || || ||||| Sbjct 2794523 GAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGG 2794582 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| |||||| || | | || | ||| ||| | || || Sbjct 2794583 GGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCA 2794642 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || ||||| || |||||||| ||||| Sbjct 2794643 ACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134323194180