Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 6e-24
>seq2
Length=3515922
Score = 125 bits (138), Expect = 6e-24
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||||||||||| || || ||| || || ||||||||
Sbjct 2794724 GTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCATCCTCGAGCTGTTTACCG 2794783
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| ||||||| ||||| || || |||||||||||||| ||||| ||||| ||
Sbjct 2794784 GCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTG 2794843
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | ||||||| | || || || || | ||| | || |||||||||| |||
Sbjct 2794844 ACATTGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTC 2794903
Query 114366 TTTACAAAAATCTGCATGG 114384
|| || || ||||||||||
Sbjct 2794904 TTGACGAAGATCTGCATGG 2794922
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||||||||| ||||||| || ||||| | || || || ||||||||||| |||
Sbjct 2794009 ACCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 2794068
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| || || ||| ||||| || || |||||| |||| || | ||| ||||| || ||
Sbjct 2794069 CAGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGG 2794128
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||||| || ||||| |||||| ||| | | |||| |||||| | | |||||
Sbjct 2794129 GATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGAC 2794188
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | ||| ||||| |||| ||| || ||||| || |||||
Sbjct 2794189 TTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || ||||| | ||| | ||| | || ||||| || ||||||||||| ||
Sbjct 2794235 ATTCCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCT 2794294
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || || || || || || || ||| |||| | || || ||||||||
Sbjct 2794295 GAGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGT 2794354
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | |||| || || | ||||||
Sbjct 2794355 GGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCG 2794414
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | ||| ||||||||||||||||| || || ||||||||
Sbjct 2794415 ACCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCAT 2794464
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || | ||| | || |||||||| || |||||||| |||
Sbjct 2794463 ATTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCG 2794522
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||||||||||| || || || |||| ||||| || || |||||
Sbjct 2794523 GAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGG 2794582
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| |||||||| ||||| |||||| || | | || | ||| ||| | || ||
Sbjct 2794583 GGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCA 2794642
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || ||||| || ||||| || |||||||| |||||
Sbjct 2794643 ACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134323194180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |