Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq8 214 3e-50
seq1 168 1e-36
>seq8
Length=1658097
Score = 214 bits (236), Expect = 3e-50
Identities = 1061/1654 (64%), Gaps = 79/1654 (5%)
Strand=Plus/Minus
Query 243761 GCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGG 243820
|||||| |||| | ||||||||||||||||| ||||| || | |||| || || |
Sbjct 1351906 GCGGCCATGGTGCGGAGGTAGTACATGCCGGTTTTGAGGCCCATCTTCCAGCCGGCGAAG 1351847
Query 243821 TGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTG 243880
||||||| || | || ||| || | | || || || || |||
Sbjct 1351846 TGCATGGATGTGATTTTGCCCATGGTGGGTT----------CTTTCA-AGTG-GATGTTT 1351799
Query 243881 AGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG-GTCCTT 243939
|| || ||| |||||||| ||||| |||| || || ||||| || || |||| |
Sbjct 1351798 AGAGATTGGGACTGGTCGATGAAGGCTCCCCGATCGGCTGCCATCTGGAGGATAGTCCGT 1351739
Query 243940 CTGA-GATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCG- 243997
| ||| || || || |||||||| | | ||||| || | |||| || |
Sbjct 1351738 TGGCTGATTTCCCAGACA--GTCTTGTACAGTGCCTTGATGTCGGCAGGGATG--TTGGG 1351683
Query 243998 -ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAG 244056
|||||||| ||||| || | | |||||| || | |||||| || ||| ||
Sbjct 1351682 AATGTTCTGAACCGAACCACCCTCGGCGATGATACGGTTCTTCATGTTGTCTGACCAGAG 1351623
Query 244057 GCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTCTCCCGA 244113
|| | | |||| ||| || | ||| ||| || ||||| ||||| || |
Sbjct 1351622 ACCAAGGTCGACCAGATCCTT---CAAGAGCCATGGGTTGACGACCTGGAACTCACCAGC 1351566
Query 244114 CAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAG 244173
||| || || || ||||| |||| | ||||||| || || ||||||||||
Sbjct 1351565 CAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCGAAGCATTCGTTGTTGCCCAG 1351506
Query 244174 TATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTG 244233
||||| | || ||| || ||||| || | || || ||| ||| | || || |
Sbjct 1351505 GATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCATA 1351446
Query 244234 CCTCTGG--ATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGT 244291
| ||| ||| | | | | || ||| ||||||| | | || ||
Sbjct 1351445 --TTTGGCAATGTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCGGATGGGG-------- 1351396
Query 244292 TTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTC 244351
||| |||||||||| |||| || | || | ||| |||||||||||||| |||
Sbjct 1351395 -TGACATTCCACATGTCATACTGGAGAATGCCTTGTGAGACTGGGCTGCCCTCGTATGTC 1351337
Query 244352 GGGTAGGGACCGTCGCGCTGG-GCCAGCTTACA-GCTCTCGTCGAGGGCGGCGTAGTAGA 244409
|| | || | || || || || | || | | || ||| || |||| |||||
Sbjct 1351336 TCATATGTGCCTT-GCTCTTTTGCAAGTTCGCACGATGCAGT-GAGAGCCGCGTGGTAGA 1351279
Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGAAGGG--GATGC 244466
||||||| |||||| |||||| | || |||| || | || ||||| || ||
Sbjct 1351278 TGGTCTCAAAGATCTGGATGTTCAGTTGTCGAGCCTCTGGAG-AGTCAAAGGGCAGACGC 1351220
Query 244467 CCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCT 244526
| || | |||| | || || || || || || || | |||||| |||| ||||||
Sbjct 1351219 AGAGCA--AGGAAGGCATCTGCAAGACCTTGGACCCCAAGGCCGATAGGTCGATGTCGCA 1351162
Query 244527 TGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGT 244586
| ||| | |||| || || || ||||| ||||| |||||| | ||||| | |
Sbjct 1351161 TATTGCTCTTCCTGGCCTCAGGAACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAAAT 1351102
Query 244587 TGCGGGTGATCATGCGGACGACGTCGGCCAG-CAGCTGAAAGTCGTACTCGTAGGGATCC 244645
||||||||| | | ||| || || | || ||| ||| |||||| ||
Sbjct 1351101 TGCGGGTGACGACCTGAGTGACCTCATGAAGGCGGCCGAA-GTCATACTCG-------CC 1351050
Query 244646 TCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCC 244705
||| | |||| ||||| | || || | | |||| |||||||| ||
Sbjct 1351049 ACGGGGTTGGTCG-----ACAAAAGTGGGAAGAGCCAGGGAAGCCAAATTGCAGACAGCA 1350995
Query 244706 ACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTG--ATGG 244763
||||| || | ||| ||| ||| |||||||||||||| || || ||| ||||
Sbjct 1350994 ACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAGAGATT--TGAGCTTCGAATGG 1350937
Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823
|||||| || || || ||| ||| |||||||| ||||||||||||||| ||||
Sbjct 1350936 TGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCATCCTTGTAGAGCATGTAGGGAG 1350877
Query 244824 CCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTC 244882
||| ||||| ||| || | || | ||| | ||| || | | |||||||| |||
Sbjct 1350876 TCCCAGTCTCAGTCTGAGCCTCAAGAATCGCA-TACCACAGCTTCTGGGCCTTGACGGTC 1350818
Query 244883 CTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAG 244942
|| | ||||||| || || | ||| || ||| ||||||| ||| ||
Sbjct 1350817 TGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGCTCCTGGAACTCGTCGCCATAG 1350758
Query 244943 ACCTCGTCTAGGCCGGG-GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTT 245001
|| ||| | || || || || | | ||||| | ||| ||||||| | | ||
Sbjct 1350757 ACATCGGCCAGACCTGGAGCCTCATGA-GGGCAGAAAAGAGTCCACTCCTGGTTCTTCTC 1350699
Query 245002 GACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG 245061
||| | || |||||| | ||| ||| |||| | || | ||| ||||| | || |
Sbjct 1350698 GACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGAC 1350639
Query 245062 CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGG 245121
|| ||| ||| |||||| ||||| | || || || |||||||| ||||||| ||
Sbjct 1350638 TTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGG 1350579
Query 245122 CTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCT 245180
||||| ||||| |||| || ||||| ||||||||||| |||||||| || | |
Sbjct 1350578 CTCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGC 1350519
Query 245181 CGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCT 245240
|| | |||||| | |||| | || | | || || || || ||||| ||
Sbjct 1350518 CGTG-TTGTTGAAAACACGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGTTCCTG 1350460
Query 245241 TGATGTAGGCGCC-CTTGCCC--CTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGT 245297
|| |||| ||| |||| | || | || || || | || | || || |||
Sbjct 1350459 CAATATAGGAGCCAGTTGCACGAATGCAG-TGAGCATTGAGA--CCGATGCCACCAGCGG 1350403
Query 245298 GCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACT 245357
||||||||| | ||| ||| |||||| ||||| |||||||| ||||| || ||
Sbjct 1350402 TCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATCCT 1350343
Query 245358 TCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGG 245391
|||||| || || ||||| ||||||||||| ||
Sbjct 1350342 TCATGTCGATCAAGAAGCAAGAGGACAGCTGAGG 1350309
>seq1
Length=4142182
Score = 168 bits (186), Expect = 1e-36
Identities = 346/509 (68%), Gaps = 13/509 (3%)
Strand=Plus/Plus
Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGAT 42590
|| ||||| | ||||||||| ||||| | ||| |||| |||| ||| | ||||
Sbjct 2622018 ATGGAGAATATCCACTCTGAGATGTACTC---ACTCCTCATCGACACATACGTGAAGGAT 2622074
Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650
||| ||| | |||||| | || || || || || |||||||| |||||||
Sbjct 2622075 CCCAAAGAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATACGGAAGAAG 2622134
Query 42651 GCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTA 42710
|| |||||||| || | |||||| | || | || |||| | | |||||
Sbjct 2622135 GCCGACTGGGCTCTTAGATGGATCTCTGATAAGGAGTCCACTTTCGCTCAACGACTGGTT 2622194
Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770
|| || | ||||||||||| ||||||||||| || | || || || ||||||||||||
Sbjct 2622195 GCTTTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCTTCAATCTTCTGGCTC 2622254
Query 42771 AAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829
||| || | | ||| |||||| || |||||||| || || ||||||||| | || ||
Sbjct 2622255 AAG-AGCAAGGGTCTGATGCCAGGTCTCACCTTTTCAAATGAACTCATCTCTCGTGATGA 2622313
Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC 42889
||| |||| | || ||||| ||||| | || | || |||| ||||||||||
Sbjct 2622314 GGGTATGCACACCGATTTTGCATGCCTAC---TCCTGCAACATCTCAAGCACAAGCCCGA 2622370
Query 42890 GAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949
| ||| | | ||||| || || || | || || || |||||||| ||
Sbjct 2622371 CCAAAAGCTCATTGAGAAGGTCATCGTCGAAGCAGTCGCTATTGAAAAAGAGTTCCTAAC 2622430
Query 42950 GCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009
|| |||| || || | || | ||||||||| | ||||||||| ||||||| |
Sbjct 2622431 TGAGGCGCTCCCTGTCGGCTTGCTGGGCATGAACTCTAAGCTCATGTGCCAGTACATTGA 2622490
Query 43010 GTACGTCGCCGACCATCTCCTG--TGCCA 43036
|| |||||||||| | | ||| |||||
Sbjct 2622491 GTTTGTCGCCGACCGTTTGCTGCTTGCCA 2622519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944339022936400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |