Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq8 214 3e-50 seq1 168 1e-36 >seq8 Length=1658097 Score = 214 bits (236), Expect = 3e-50 Identities = 1061/1654 (64%), Gaps = 79/1654 (5%) Strand=Plus/Minus Query 243761 GCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGG 243820 |||||| |||| | ||||||||||||||||| ||||| || | |||| || || | Sbjct 1351906 GCGGCCATGGTGCGGAGGTAGTACATGCCGGTTTTGAGGCCCATCTTCCAGCCGGCGAAG 1351847 Query 243821 TGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTG 243880 ||||||| || | || ||| || | | || || || || ||| Sbjct 1351846 TGCATGGATGTGATTTTGCCCATGGTGGGTT----------CTTTCA-AGTG-GATGTTT 1351799 Query 243881 AGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG-GTCCTT 243939 || || ||| |||||||| ||||| |||| || || ||||| || || |||| | Sbjct 1351798 AGAGATTGGGACTGGTCGATGAAGGCTCCCCGATCGGCTGCCATCTGGAGGATAGTCCGT 1351739 Query 243940 CTGA-GATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCG- 243997 | ||| || || || |||||||| | | ||||| || | |||| || | Sbjct 1351738 TGGCTGATTTCCCAGACA--GTCTTGTACAGTGCCTTGATGTCGGCAGGGATG--TTGGG 1351683 Query 243998 -ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAG 244056 |||||||| ||||| || | | |||||| || | |||||| || ||| || Sbjct 1351682 AATGTTCTGAACCGAACCACCCTCGGCGATGATACGGTTCTTCATGTTGTCTGACCAGAG 1351623 Query 244057 GCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTCTCCCGA 244113 || | | |||| ||| || | ||| ||| || ||||| ||||| || | Sbjct 1351622 ACCAAGGTCGACCAGATCCTT---CAAGAGCCATGGGTTGACGACCTGGAACTCACCAGC 1351566 Query 244114 CAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAG 244173 ||| || || || ||||| |||| | ||||||| || || |||||||||| Sbjct 1351565 CAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCGAAGCATTCGTTGTTGCCCAG 1351506 Query 244174 TATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTG 244233 ||||| | || ||| || ||||| || | || || ||| ||| | || || | Sbjct 1351505 GATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCATA 1351446 Query 244234 CCTCTGG--ATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGT 244291 | ||| ||| | | | | || ||| ||||||| | | || || Sbjct 1351445 --TTTGGCAATGTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCGGATGGGG-------- 1351396 Query 244292 TTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTC 244351 ||| |||||||||| |||| || | || | ||| |||||||||||||| ||| Sbjct 1351395 -TGACATTCCACATGTCATACTGGAGAATGCCTTGTGAGACTGGGCTGCCCTCGTATGTC 1351337 Query 244352 GGGTAGGGACCGTCGCGCTGG-GCCAGCTTACA-GCTCTCGTCGAGGGCGGCGTAGTAGA 244409 || | || | || || || || | || | | || ||| || |||| ||||| Sbjct 1351336 TCATATGTGCCTT-GCTCTTTTGCAAGTTCGCACGATGCAGT-GAGAGCCGCGTGGTAGA 1351279 Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGAAGGG--GATGC 244466 ||||||| |||||| |||||| | || |||| || | || ||||| || || Sbjct 1351278 TGGTCTCAAAGATCTGGATGTTCAGTTGTCGAGCCTCTGGAG-AGTCAAAGGGCAGACGC 1351220 Query 244467 CCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCT 244526 | || | |||| | || || || || || || || | |||||| |||| |||||| Sbjct 1351219 AGAGCA--AGGAAGGCATCTGCAAGACCTTGGACCCCAAGGCCGATAGGTCGATGTCGCA 1351162 Query 244527 TGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGT 244586 | ||| | |||| || || || ||||| ||||| |||||| | ||||| | | Sbjct 1351161 TATTGCTCTTCCTGGCCTCAGGAACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAAAT 1351102 Query 244587 TGCGGGTGATCATGCGGACGACGTCGGCCAG-CAGCTGAAAGTCGTACTCGTAGGGATCC 244645 ||||||||| | | ||| || || | || ||| ||| |||||| || Sbjct 1351101 TGCGGGTGACGACCTGAGTGACCTCATGAAGGCGGCCGAA-GTCATACTCG-------CC 1351050 Query 244646 TCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCC 244705 ||| | |||| ||||| | || || | | |||| |||||||| || Sbjct 1351049 ACGGGGTTGGTCG-----ACAAAAGTGGGAAGAGCCAGGGAAGCCAAATTGCAGACAGCA 1350995 Query 244706 ACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTG--ATGG 244763 ||||| || | ||| ||| ||| |||||||||||||| || || ||| |||| Sbjct 1350994 ACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAGAGATT--TGAGCTTCGAATGG 1350937 Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823 |||||| || || || ||| ||| |||||||| ||||||||||||||| |||| Sbjct 1350936 TGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCATCCTTGTAGAGCATGTAGGGAG 1350877 Query 244824 CCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTC 244882 ||| ||||| ||| || | || | ||| | ||| || | | |||||||| ||| Sbjct 1350876 TCCCAGTCTCAGTCTGAGCCTCAAGAATCGCA-TACCACAGCTTCTGGGCCTTGACGGTC 1350818 Query 244883 CTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAG 244942 || | ||||||| || || | ||| || ||| ||||||| ||| || Sbjct 1350817 TGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGCTCCTGGAACTCGTCGCCATAG 1350758 Query 244943 ACCTCGTCTAGGCCGGG-GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTT 245001 || ||| | || || || || | | ||||| | ||| ||||||| | | || Sbjct 1350757 ACATCGGCCAGACCTGGAGCCTCATGA-GGGCAGAAAAGAGTCCACTCCTGGTTCTTCTC 1350699 Query 245002 GACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG 245061 ||| | || |||||| | ||| ||| |||| | || | ||| ||||| | || | Sbjct 1350698 GACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGAC 1350639 Query 245062 CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGG 245121 || ||| ||| |||||| ||||| | || || || |||||||| ||||||| || Sbjct 1350638 TTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGG 1350579 Query 245122 CTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCT 245180 ||||| ||||| |||| || ||||| ||||||||||| |||||||| || | | Sbjct 1350578 CTCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGC 1350519 Query 245181 CGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCT 245240 || | |||||| | |||| | || | | || || || || ||||| || Sbjct 1350518 CGTG-TTGTTGAAAACACGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGTTCCTG 1350460 Query 245241 TGATGTAGGCGCC-CTTGCCC--CTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGT 245297 || |||| ||| |||| | || | || || || | || | || || ||| Sbjct 1350459 CAATATAGGAGCCAGTTGCACGAATGCAG-TGAGCATTGAGA--CCGATGCCACCAGCGG 1350403 Query 245298 GCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACT 245357 ||||||||| | ||| ||| |||||| ||||| |||||||| ||||| || || Sbjct 1350402 TCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATCCT 1350343 Query 245358 TCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGG 245391 |||||| || || ||||| ||||||||||| || Sbjct 1350342 TCATGTCGATCAAGAAGCAAGAGGACAGCTGAGG 1350309 >seq1 Length=4142182 Score = 168 bits (186), Expect = 1e-36 Identities = 346/509 (68%), Gaps = 13/509 (3%) Strand=Plus/Plus Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGAT 42590 || ||||| | ||||||||| ||||| | ||| |||| |||| ||| | |||| Sbjct 2622018 ATGGAGAATATCCACTCTGAGATGTACTC---ACTCCTCATCGACACATACGTGAAGGAT 2622074 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 ||| ||| | |||||| | || || || || || |||||||| ||||||| Sbjct 2622075 CCCAAAGAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATACGGAAGAAG 2622134 Query 42651 GCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTA 42710 || |||||||| || | |||||| | || | || |||| | | ||||| Sbjct 2622135 GCCGACTGGGCTCTTAGATGGATCTCTGATAAGGAGTCCACTTTCGCTCAACGACTGGTT 2622194 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 || || | ||||||||||| ||||||||||| || | || || || |||||||||||| Sbjct 2622195 GCTTTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCTTCAATCTTCTGGCTC 2622254 Query 42771 AAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || | | ||| |||||| || |||||||| || || ||||||||| | || || Sbjct 2622255 AAG-AGCAAGGGTCTGATGCCAGGTCTCACCTTTTCAAATGAACTCATCTCTCGTGATGA 2622313 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC 42889 ||| |||| | || ||||| ||||| | || | || |||| |||||||||| Sbjct 2622314 GGGTATGCACACCGATTTTGCATGCCTAC---TCCTGCAACATCTCAAGCACAAGCCCGA 2622370 Query 42890 GAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 | ||| | | ||||| || || || | || || || |||||||| || Sbjct 2622371 CCAAAAGCTCATTGAGAAGGTCATCGTCGAAGCAGTCGCTATTGAAAAAGAGTTCCTAAC 2622430 Query 42950 GCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 || |||| || || | || | ||||||||| | ||||||||| ||||||| | Sbjct 2622431 TGAGGCGCTCCCTGTCGGCTTGCTGGGCATGAACTCTAAGCTCATGTGCCAGTACATTGA 2622490 Query 43010 GTACGTCGCCGACCATCTCCTG--TGCCA 43036 || |||||||||| | | ||| ||||| Sbjct 2622491 GTTTGTCGCCGACCGTTTGCTGCTTGCCA 2622519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339022936400