Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 7e-31
seq5 107 2e-18
>seq2
Length=3515922
Score = 149 bits (164), Expect = 7e-31
Identities = 164/217 (76%), Gaps = 6/217 (3%)
Strand=Plus/Plus
Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055
|| |||||||||||| ||||||||||| ||||| ||||| || | ||| || || | ||
Sbjct 2794024 CAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATC 2794083
Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115
|| |||||||| |||||||| || |||| ||||||||||| ||| | || |||||||||
Sbjct 2794084 CTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTC 2794143
Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGAT 42172
||| ||| ||||| | | | ||||| |||| || || || | ||| ||
Sbjct 2794144 TTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTC---TCGACTTCCAGCGTAAT 2794200
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| |||||||| | ||||| |||||||||||||||
Sbjct 2794201 CGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| |||| | ||| | ||||| ||||| || |||||| || || |||||||| |
Sbjct 2794694 CCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTC 2794753
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| || || | || || ||||| ||||| ||||| ||||| |||||||| || | ||
Sbjct 2794754 AAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGA 2794813
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| || ||||||||| ||| || |||| | | | ||||||||||| || ||
Sbjct 2794814 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACC 2794873
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| |||||||| ||||| || | ||||| || ||||| |||||
Sbjct 2794874 TCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
>seq5
Length=2445035
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||||||||||||||| || || || || |||| || || ||||| || ||||| |
Sbjct 1847862 CCTTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 1847803
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| |||||||||||||| | ||| | || ||||||||| ||| || ||||| |
Sbjct 1847802 TCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 1847743
Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198
| | ||||| ||||| || |||| |||||||| |||||||| || ||||| || |
Sbjct 1847742 CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1847683
Query 42199 AG 42200
||
Sbjct 1847682 AG 1847681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212698147600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |