Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 2e-23
>seq2
Length=3515922
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||||||||||| || |||||||| || | || |||||| |||||
Sbjct 2794481 AGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 2794540
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| ||||| |||||| | || || || ||||| || || || || ||||| || |||
Sbjct 2794541 TCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCT 2794600
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||| | | || || || | || | ||||
Sbjct 2794601 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTC 2794660
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||||| || | ||| || || ||||||||||||
Sbjct 2794661 TTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | ||| || || ||||| | || ||||| || ||||||||||| |||| |
Sbjct 2794238 CCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAG 2794297
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || || |||| || |||||||||||||| | || | || |||||||| || ||
Sbjct 2794298 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGG 2794357
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || ||||| || || ||| || || | ||||| | || ||
Sbjct 2794358 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACC 2794417
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|||| || | ||||||||||||| |||||| ||||| || ||||||
Sbjct 2794418 TCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || ||||||||||| | |||||| | || || ||||| || |||
Sbjct 2794724 GTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCATCCTCGAGCTGTTTACCG 2794783
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| |||||||| || |||||||| ||||| || || || || || |||
Sbjct 2794784 GCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTG 2794843
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || || | | || || || | || | ||||||||||||||||||
Sbjct 2794844 ACATTGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTC 2794903
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 2794904 TTGACGAAGATCTGCAT 2794920
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | ||| ||||| | ||| | || || || ||||||||||| || |
Sbjct 2794009 ACCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 2794068
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | || |||||||||||||| || | || || | |||||||||||| ||
Sbjct 2794069 CAGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGG 2794128
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || ||||| || ||| || ||| || | || || | || ||
Sbjct 2794129 GATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGAC 2794188
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| | || | |||||||| |||||||| || || || |||||||||
Sbjct 2794189 TTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644706316600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |