Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8 154 1e-32 seq2 100 3e-16 seq5 87.8 2e-12 >seq8 Length=1658097 Score = 154 bits (170), Expect = 1e-32 Identities = 607/950 (64%), Gaps = 11/950 (1%) Strand=Plus/Minus Query 153603 GACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCA 153661 || |||| ||| ||||| || ||| || |||| | || ||| |||||||||| ||| Sbjct 1351015 GAAGCCAAATTGCAGACAGCAACCTCATCAGGCGCTG-TGAACTCGACGATCTCGGTGCA 1350957 Query 153662 GAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTC 153721 ||| || || | ||| |||||| || | ||| ||||| || | |||||| || || Sbjct 1350956 GAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCATC 1350897 Query 153722 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATG 153778 ||| |||||||||| || || ||||| || | || | || | ||| Sbjct 1350896 CTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCA--- 1350840 Query 153779 CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAG 153838 ||| | ||| || || ||| || |||||||| | || |||| |||||| || Sbjct 1350839 CAGCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAG 1350780 Query 153839 TCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAG 153898 || ||||||||||| ||| ||||| || || ||| || ||| || || | || Sbjct 1350779 CTCCTGGAACTCGTCGCCATAGACATCGGCCAGACCTGGAGCCTCATGAGGGCAGAAAAG 1350720 Query 153899 CGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTA 153958 | |||| | || | ||| || |||||||| || || ||| | || || Sbjct 1350719 AGTCCACTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATA 1350660 Query 153959 CATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCT 154018 | ||||| || || | || ||| ||| ||| | ||||||| || | Sbjct 1350659 GAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAATC 1350600 Query 154019 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CC 154075 ||| ||| |||||||| || || | ||||| ||| | ||||| ||||| || Sbjct 1350599 GAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCC 1350540 Query 154076 GCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCT 154135 |||||| ||||||| ||| || | |||||||| || |||| |||||| || || | Sbjct 1350539 GCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATT 1350480 Query 154136 TGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195 || || || ||||| || | | ||| || || | || | || | Sbjct 1350479 TGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTGAG 1350420 Query 154196 GCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCC 154255 || ||||| || || ||| || || || ||| ||||| ||||||||| Sbjct 1350419 ACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCC 1350360 Query 154256 GTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGT 154315 ||||||||||| || | | ||| |||||| || || ||| || || | || Sbjct 1350359 CTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCTGAGGTTGTGGTGT 1350300 Query 154316 TCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTA 154375 ||| || ||||| ||||| || || || || || ||| ||| | | ||| Sbjct 1350299 TCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTA 1350240 Query 154376 CGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCAT 154435 || || ||||| | || |||||||| ||||| ||||| | || || ||||| | ||| Sbjct 1350239 TGTCTCAATGGCCTTCTCAATATCATCACCGTGGATGCCAACAGCCACACGCATAATCAT 1350180 Query 154436 GTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGT 154495 |||||| || |||||||||||| ||| | || |||| || ||| || || | || Sbjct 1350179 GTGCTGTGGTCGTTCGGCGACTTGCTTGCCGATTTTCAGCAGGTATGATTTCTCTAACGT 1350120 Query 154496 TTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCG 154545 ||| | || || || | ||| | || ||| |||| | ||||||| Sbjct 1350119 CTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCCG 1350070 >seq2 Length=3515922 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||| | || || ||| || ||||| || |||| | Sbjct 2794499 GATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCA 2794558 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| ||||| || || ||||| || || ||||| ||||| ||| | || | || | Sbjct 2794559 AAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTC-TTGAATCTTGCTCTTGAC 2794617 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||| ||| ||||||| ||||| | ||| | || || ||||| ||||| | Sbjct 2794618 GTTG-TCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCT 2794676 Query 138599 TTACAAAAATCTGCAT 138614 | |||||||| ||||| Sbjct 2794677 TCACAAAAATTTGCAT 2794692 >seq5 Length=2445035 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||||||||| ||||||||||||| ||||| ||| |||||||| || |||| ||| Sbjct 1847862 CCTTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 1847803 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || ||||| ||||| || || || || || ||||| ||| || ||| | |||| Sbjct 1847802 TCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTG- 1847744 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||| | || || ||||||| || | || || || || || || || || Sbjct 1847743 TCGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1847684 Query 138604 AA 138605 || Sbjct 1847683 AA 1847682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262306950800