Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 seq8 82.4 7e-11 >seq2 Length=3515922 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| ||||| || || | || ||||| || || |||||||| || || || || || Sbjct 2794235 ATTCCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCT 2794294 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || || | || || || ||| | |||||||||||||||||||| Sbjct 2794295 GAGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGT 2794354 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || ||||| || || |||| || | || | || || ||||| || Sbjct 2794355 GGGATGCCCTCCTTGTCTTGGATCTTCGACTTGA-CGTTGTCAATCGTATCTGAAGATTC 2794413 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || | ||| |||||||| |||||||| || || || ||||| Sbjct 2794414 GACCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCAT 2794464 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | || ||||| || || ||||| || ||||| || || ||| Sbjct 2794463 ATTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCG 2794522 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || || | ||| ||||| || | |||| |||||||| ||||| Sbjct 2794523 GAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGG 2794582 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || |||||||| || |||||||| || |||| || | || | ||| ||| ||||| Sbjct 2794583 GGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGCTCGACTC 2794641 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| || ||||| || ||||| || |||||||||||||| Sbjct 2794642 AACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || ||||| | | || | |||| || || ||||| ||||| || |||||| Sbjct 2794691 ATTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCG 2794750 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| ||| || | ||||| || ||| | || | || ||||| || || Sbjct 2794751 CTCAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGA 2794810 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| || || || || || |||| || | ||||||| ||||| Sbjct 2794811 GGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCA 2794870 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || | || |||||||| | ||| || || || || ||||| Sbjct 2794871 ACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920 >seq8 Length=1658097 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/151 (73%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 || || || || || |||||||||||||| || |||||||| ||||| | ||| |||| Sbjct 1350867 GAGACTGGGACTCCCTACATGCTCTACAAGGATGCCTGCAATAGGAAGAGCAACCAGAAG 1350926 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAAT--ACAGCGATG 123723 |||||||| || || | | ||||| ||| |||| || |||| | |||||| Sbjct 1350927 AACTTGGGCACCATTCGAAGCTCAAATCTCTGCACCGAGATCGTCGAGTTCACAGCG--C 1350984 Query 123724 CCGATCAAGTGGCCGTGTGTAATTTGGCTTC 123754 | ||| | || || || || ||||||||||| Sbjct 1350985 CTGATGAGGTTGCTGTCTGCAATTTGGCTTC 1351015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003115249400