Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 4e-20
seq8 82.4 7e-11
>seq2
Length=3515922
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| ||||| || || | || ||||| || || |||||||| || || || || ||
Sbjct 2794235 ATTCCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCT 2794294
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| || || | || || || ||| | ||||||||||||||||||||
Sbjct 2794295 GAGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGT 2794354
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || ||||| || || |||| || | || | || || ||||| ||
Sbjct 2794355 GGGATGCCCTCCTTGTCTTGGATCTTCGACTTGA-CGTTGTCAATCGTATCTGAAGATTC 2794413
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || || || | ||| |||||||| |||||||| || || || |||||
Sbjct 2794414 GACCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCAT 2794464
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || || | | || ||||| || || ||||| || ||||| || || |||
Sbjct 2794463 ATTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCG 2794522
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| || || | ||| ||||| || | |||| |||||||| |||||
Sbjct 2794523 GAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGG 2794582
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| |||||||| || |||||||| || |||| || | || | ||| ||| |||||
Sbjct 2794583 GGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGCTCGACTC 2794641
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || ||||| || ||||| || ||||||||||||||
Sbjct 2794642 AACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || ||||| | | || | |||| || || ||||| ||||| || ||||||
Sbjct 2794691 ATTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCG 2794750
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | ||| ||| || | ||||| || ||| | || | || ||||| || ||
Sbjct 2794751 CTCAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGA 2794810
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||||||||| || || || || || |||| || | ||||||| |||||
Sbjct 2794811 GGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCA 2794870
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| || | || |||||||| | ||| || || || || |||||
Sbjct 2794871 ACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
>seq8
Length=1658097
Score = 82.4 bits (90), Expect = 7e-11
Identities = 110/151 (73%), Gaps = 4/151 (3%)
Strand=Plus/Plus
Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665
|| || || || || |||||||||||||| || |||||||| ||||| | ||| ||||
Sbjct 1350867 GAGACTGGGACTCCCTACATGCTCTACAAGGATGCCTGCAATAGGAAGAGCAACCAGAAG 1350926
Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAAT--ACAGCGATG 123723
|||||||| || || | | ||||| ||| |||| || |||| | ||||||
Sbjct 1350927 AACTTGGGCACCATTCGAAGCTCAAATCTCTGCACCGAGATCGTCGAGTTCACAGCG--C 1350984
Query 123724 CCGATCAAGTGGCCGTGTGTAATTTGGCTTC 123754
| ||| | || || || || |||||||||||
Sbjct 1350985 CTGATGAGGTTGCTGTCTGCAATTTGGCTTC 1351015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003115249400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |