Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq8 167 4e-36
>seq8
Length=1658097
Score = 167 bits (184), Expect = 4e-36
Identities = 483/728 (66%), Gaps = 13/728 (2%)
Strand=Plus/Minus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896
||||| || || ||||||||||||| | || | | || | | || |||||||||
Sbjct 1351939 TCTTGATCGACAGTGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATG 1351880
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
||||| || |||||| ||| ||| ||| | ||||||||| | | ||||| || | ||
Sbjct 1351879 CCGGTTTTGAGGCCCATCTTCCAGCCGGCGAAGTGCATGGATGTGATTTTGCCCATGGTG 1351820
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
|| || || ||| ||||| ||||| ||| ||||||||||| | ||||||| ||
Sbjct 1351819 GGTTCTTTCAAGTGGATGTTTAGAGATTGGGACTGGTCGATGAAGGCTCCCCGATCGGCT 1351760
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | || || ||| || || ||||| || |||||| ||| | || ||
Sbjct 1351759 GCCATCTGGAGGATAGTCCGTTGGCTGATTTCCCAGACAGTCTTGTACAGTGCCTTGATG 1351700
Query 204077 TGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| ||| | | | | || ||| | ||| || ||||| || | | || |
Sbjct 1351699 TCGGCAGGGATGT-TGGGAATGTTCTGAACCGAACCACCCTCGGCGATGATACGGTTCTT 1351641
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194
| | | || ||| | | |||| | || ||| ||| || || ||||||| ||
Sbjct 1351640 CATGTTGTCTGACCAGA-GACCAAGGTCGACCAGATCCTTCAAGAGCCATGGGTTGACGA 1351582
Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254
||| || || || | ||| || | |||| | | | |||| || |||| |||||
Sbjct 1351581 CCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCGAAGC 1351522
Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314
||||||||||| | ||||| | ||| || || ||||| ||||| | ||| || |
Sbjct 1351521 ATTCGTTGTTGCCCAGGATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAG 1351462
Query 204315 AGTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCA--TCG 204371
||||||| ||||| || ||| | | | || |||| ||| ||| || || |||
Sbjct 1351461 AGTTGCGAACACCATA-TTTGGCAATGTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCG 1351403
Query 204372 CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431
| |||| | || ||||||||| |||| | |||||||| ||||||||||||||
Sbjct 1351402 GA-TGGG-GTGACATTCCACATGTCATACTGGAGAATGCCTTGTGAGACTGGGCTGCCCT 1351345
Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491
||| ||| ||| | | ||||| ||| || | |||||| || | | || |
Sbjct 1351344 CGTATGTCTCATATGTGCCTTGCTCTTTTGCAAGTTCGCACGATGCAGTGAGAGCCGCGT 1351285
Query 204492 AGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTCCGTTCCGTCAAACGCC 204550
||| ||||||||||||||||| | ||| | | || || ||||| | |||||| | |
Sbjct 1351284 GGTAGATGGTCTCAAAGATCTGGATGTTCAGT-TGTCGAGCCTCTGGAGAGTCAAAGGGC 1351226
Query 204551 AGACCCAG 204558
|||| |||
Sbjct 1351225 AGACGCAG 1351218
Score = 84.2 bits (92), Expect = 3e-11
Identities = 176/259 (68%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 205136 AGAGACCACATCTGATCGTCTT-TC-ACCCTCTCCATAAACAGGTCGCTGATCCACAGGC 205193
|||| |||| ||| | |||| || || | |||||| |||| ||| | ||||||
Sbjct 1350721 AGAGTCCACTCCTGGT--TCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAG 1350664
Query 205194 CGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCC 205253
| || ||||| |||||||| | | | | || | || |||||||| ||| | |||
Sbjct 1350663 CATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGA 1350604
Query 205254 AAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGT 205313
|| | | ||| |||||||||||||| || | | ||| | || || || | |||||
Sbjct 1350603 AATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGT 1350544
Query 205314 TCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGAC 205373
| || |||||||| || ||| | | | ||||||||| |||| ||| || | || |
Sbjct 1350543 TGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAATGAGTC 1350484
Query 205374 CGTTGGCGGTCCCGTTCGT 205392
| || | ||||| || ||
Sbjct 1350483 CATTTGATGTCCCATTGGT 1350465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155050908400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |