Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 132 1e-25
seq4 89.7 1e-12
seq5 84.2 5e-11
>seq2
Length=3515922
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| || ||||||||||| || || |||| ||||||||| | | ||
Sbjct 2794472 CGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTG 2794531
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| || ||||||||||| ||||| ||||| ||||| ||||| || |||
Sbjct 2794532 CGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCT 2794591
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||| ||| |||| ||| || | | || || || | |
Sbjct 2794592 TCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAACCTCAAGC 2794651
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || ||||| ||||||||||||||
Sbjct 2794652 GTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTG 2794689
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||| || || || |||||||| || ||||| || | ||||||||| | | |||
Sbjct 2794244 CGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAGAGAGTT 2794303
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| ||||||||||| | || ||||||||||| || ||
Sbjct 2794304 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCC 2794363
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || ||||| ||| ||| || | || |||| | ||| || || |
Sbjct 2794364 TCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGT 2794423
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || |||||||| || || || ||
Sbjct 2794424 GTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTG 2794461
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| | ||||||||||| |||| |||||| || ||| || | |||||
Sbjct 2794709 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCATCC 2794768
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||| || |||||||||||||| |||||||| || ||| ||| ||||| |||
Sbjct 2794769 TCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 2794828
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 2794829 TGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTC 2794888
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | ||| || || || || ||
Sbjct 2794889 TTGCCGGTCAAAGTCTTGACGAAGATCTG 2794917
>seq4
Length=3044656
Score = 89.7 bits (98), Expect = 1e-12
Identities = 90/114 (79%), Gaps = 5/114 (4%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAG-- 199466
|| || || ||||| ||||| | ||||||||||| |||||||||||||| | ||||
Sbjct 2776728 CGGAGACTGAGGACCAGGTGAATGGTCGACTCCTTCTGGACGTTGTAGTC--CAAAAGCG 2776671
Query 199467 TCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAA 199520
| | || ||||| || ||||| ||||||||||| || || ||||||| |||||
Sbjct 2776670 TGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGT-CGGAA 2776618
>seq5
Length=2445035
Score = 84.2 bits (92), Expect = 5e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
||||||| | |||||||| ||| || | || ||||| || ||||| ||||||||||
Sbjct 1847862 CCTTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 1847803
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||||||||| || || || || || || ||||| || || |
Sbjct 1847802 TCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 1847743
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||||| | ||| || || | ||||| ||||| |||||||| || || || |
Sbjct 1847742 CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1847683
Query 199620 A 199620
|
Sbjct 1847682 A 1847682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921373426005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |