Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 120 3e-22 seq1 111 2e-19 seq5 96.9 3e-15 >seq2 Length=3515922 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| ||||||||| |||| || ||| | | | Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| || || ||||| | || | Sbjct 2794860 GACACCATCGACAATG--TCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATC 2794803 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || |||||||| || || | |||||| | | ||| |||| Sbjct 2794802 AGCAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACA 2794743 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||| |||| ||||| || ||| | |||| || Sbjct 2794742 ACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTCCGAGGTGG 2794694 Score = 105 bits (116), Expect = 7e-18 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || | |||||||| || || || | || |||||| | | Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | ||| ||| |||| ||||| ||||| || || ||||||| Sbjct 2794177 AGACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCA 2794118 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | || || | ||| ||||| ||||| || || | || || || ||||||||| Sbjct 2794117 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAA 2794058 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTG 38456 ||| || ||||| ||| || |||||||||||||| Sbjct 2794057 CATTCAGAAGGAGAGC-ACCTTGCATTTGGTGCTG 2794024 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || || || ||||| ||||| || | || || ||| | | Sbjct 2794693 AATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAG 2794634 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 ||| | | | | |||| | |||| || || | ||||| || || || ||| | || Sbjct 2794633 CGATACCATCGACAACG--TCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGAT 2794576 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || || || || | || || || || || || |||| ||||||||| ||||||| Sbjct 2794575 CAGCAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTAC 2794516 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| || ||| |||| || ||| | || || ||| Sbjct 2794515 AACATCCAGAAAGAATCGACTCTCCATCTCGTCCTCCGT 2794477 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| ||||| || || ||||| || ||||| | || ||||| | | Sbjct 2794465 AATGCAGATCTTCGTCAAAACTCTGACCGGCAAGACGATCACACTAGAGGTCGAATCTTC 2794406 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | || |||| | || || |||| ||||| ||||| || || | |||| Sbjct 2794405 AGATACGATTGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCACCGGACC 2794347 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | || | ||| ||||| ||||| || |||| || || ||| ||||||| Sbjct 2794346 AGCAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCAGACTACA 2794287 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||| || |||||| | || || ||| | || || Sbjct 2794286 ACATTCAGAAGGAATCCACTCTCCATCTCGTTCT 2794253 >seq1 Length=4142182 Score = 111 bits (122), Expect = 2e-19 Identities = 236/342 (69%), Gaps = 14/342 (4%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA--GTC 132951 ||| ||||| ||| |||| ||||| || | || |||||||| || ||||| || Sbjct 2622338 GCATGCAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATT--TGAAAAGGTG 2622281 Query 132952 AAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAG 133011 | || ||||| || || | |||||||| || || | || || || || ||| Sbjct 2622280 AGACCTGGCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAG 2622221 Query 133012 AAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTG 133071 |||| ||||||||||| |||||||| ||||| || | |||| |||| || || Sbjct 2622220 AAGATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCA 2622161 Query 133072 GCGATCCAGCGCAGCGCCCATTCGGCCTT-TTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | |||||| | || ||||| |||||||| ||| | | ||| || || || ||||| || Sbjct 2622160 GAGATCCATCTAAGAGCCCAGTCGGCCTTCTTCCGT-ATGCAGGGGATGGTGTCGATAGC 2622102 Query 133131 GTTCAACAAACGGA-GT-TTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCG 133186 | ||| | | | || ||||||| ||| | |||||| |||||||||||| | Sbjct 2622101 ATCGAAC--AGGTATGTCTTCTCTT--TGGGATCCTTCACGTATGTGTCGATGAGGAGTG 2622046 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGC 133228 | ||||| || ||||| | |||||||| || ||| |||| Sbjct 2622045 AGTACATCTCAGAGTGGATATTCTCCATCATGACTTGGAAGC 2622004 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/199 (71%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 133252 ACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 || |||||||| | || ||||||||| | || || |||||||| || ||||| || Sbjct 2621928 ACTTGCACTTCG-GCGCTGAAACGCTCCAGCAAGTTCTCGTTGACAATACCGTCTGAAGC 2621870 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC--- 133367 ||||| || || || ||||| |||||| | ||| || | || ||||| || | Sbjct 2621869 AGCGAAGAAAGCAAGGACGTGGGAGATGAAGTAGCGTTCATCGTTGTTCAGTCGGTTGTG 2621810 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||| ||| || ||| ||||||||||| || ||||| | |||||||| |||||||| Sbjct 2621809 CCAATCGTGCAAGTCTTTGGACAGGTCGACTTCCTCTGCTGTCCAAAAGCTAGCCTCGGC 2621750 Query 133428 TTTTTTGTACATACTCCAC 133446 |||||||| ||||| Sbjct 2621749 ACGCTTGTACATGTTCCAC 2621731 >seq5 Length=2445035 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| ||||| || | |||| | Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | ||| || |||| ||||| ||||| || || | ||||| ||||| || Sbjct 1847742 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACTG 1847801 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| || || || |||| || || | | ||||||||| || |||||| Sbjct 1847802 ATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAAAG 1847861 Query 38433 G 38433 | Sbjct 1847862 G 1847862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172706217600