Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 120 3e-22
seq1 111 2e-19
seq5 96.9 3e-15
>seq2
Length=3515922
Score = 120 bits (132), Expect = 3e-22
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||||||| |||| || ||| | | |
Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | || | | |||| || |||| ||||| || || ||||| | || |
Sbjct 2794860 GACACCATCGACAATG--TCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATC 2794803
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||| || |||||||| || || | |||||| | | ||| ||||
Sbjct 2794802 AGCAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACA 2794743
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| |||| |||| ||||| || ||| | |||| ||
Sbjct 2794742 ACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTCCGAGGTGG 2794694
Score = 105 bits (116), Expect = 7e-18
Identities = 154/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| || || || || | |||||||| || || || | || |||||| | |
Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | | | ||| ||| |||| ||||| ||||| || || |||||||
Sbjct 2794177 AGACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCA 2794118
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | || || | ||| ||||| ||||| || || | || || || |||||||||
Sbjct 2794117 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAA 2794058
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTG 38456
||| || ||||| ||| || ||||||||||||||
Sbjct 2794057 CATTCAGAAGGAGAGC-ACCTTGCATTTGGTGCTG 2794024
Score = 93.3 bits (102), Expect = 4e-14
Identities = 154/219 (70%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| || || || || || || ||||| ||||| || | || || ||| | |
Sbjct 2794693 AATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAG 2794634
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
||| | | | | |||| | |||| || || | ||||| || || || ||| | ||
Sbjct 2794633 CGATACCATCGACAACG--TCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGAT 2794576
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| || || || || | || || || || || || |||| ||||||||| |||||||
Sbjct 2794575 CAGCAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTAC 2794516
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||| || ||| |||| || ||| | || || |||
Sbjct 2794515 AACATCCAGAAAGAATCGACTCTCCATCTCGTCCTCCGT 2794477
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || ||||| ||||| || || ||||| || ||||| | || ||||| | |
Sbjct 2794465 AATGCAGATCTTCGTCAAAACTCTGACCGGCAAGACGATCACACTAGAGGTCGAATCTTC 2794406
Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | || |||| | || || |||| ||||| ||||| || || | ||||
Sbjct 2794405 AGATACGATTGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCACCGGACC 2794347
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || | || | ||| ||||| ||||| || |||| || || ||| |||||||
Sbjct 2794346 AGCAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCAGACTACA 2794287
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||| || |||||| | || || ||| | || ||
Sbjct 2794286 ACATTCAGAAGGAATCCACTCTCCATCTCGTTCT 2794253
>seq1
Length=4142182
Score = 111 bits (122), Expect = 2e-19
Identities = 236/342 (69%), Gaps = 14/342 (4%)
Strand=Plus/Minus
Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA--GTC 132951
||| ||||| ||| |||| ||||| || | || |||||||| || ||||| ||
Sbjct 2622338 GCATGCAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATT--TGAAAAGGTG 2622281
Query 132952 AAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAG 133011
| || ||||| || || | |||||||| || || | || || || || |||
Sbjct 2622280 AGACCTGGCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAG 2622221
Query 133012 AAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTG 133071
|||| ||||||||||| |||||||| ||||| || | |||| |||| || ||
Sbjct 2622220 AAGATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCA 2622161
Query 133072 GCGATCCAGCGCAGCGCCCATTCGGCCTT-TTCTTTGACGCACGGCATCGTTTCGATGGC 133130
| |||||| | || ||||| |||||||| ||| | | ||| || || || ||||| ||
Sbjct 2622160 GAGATCCATCTAAGAGCCCAGTCGGCCTTCTTCCGT-ATGCAGGGGATGGTGTCGATAGC 2622102
Query 133131 GTTCAACAAACGGA-GT-TTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCG 133186
| ||| | | | || ||||||| ||| | |||||| |||||||||||| |
Sbjct 2622101 ATCGAAC--AGGTATGTCTTCTCTT--TGGGATCCTTCACGTATGTGTCGATGAGGAGTG 2622046
Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGC 133228
| ||||| || ||||| | |||||||| || ||| ||||
Sbjct 2622045 AGTACATCTCAGAGTGGATATTCTCCATCATGACTTGGAAGC 2622004
Score = 93.3 bits (102), Expect = 4e-14
Identities = 142/199 (71%), Gaps = 5/199 (3%)
Strand=Plus/Minus
Query 133252 ACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310
|| |||||||| | || ||||||||| | || || |||||||| || ||||| ||
Sbjct 2621928 ACTTGCACTTCG-GCGCTGAAACGCTCCAGCAAGTTCTCGTTGACAATACCGTCTGAAGC 2621870
Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC--- 133367
||||| || || || ||||| |||||| | ||| || | || ||||| || |
Sbjct 2621869 AGCGAAGAAAGCAAGGACGTGGGAGATGAAGTAGCGTTCATCGTTGTTCAGTCGGTTGTG 2621810
Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
||| ||| || ||| ||||||||||| || ||||| | |||||||| ||||||||
Sbjct 2621809 CCAATCGTGCAAGTCTTTGGACAGGTCGACTTCCTCTGCTGTCCAAAAGCTAGCCTCGGC 2621750
Query 133428 TTTTTTGTACATACTCCAC 133446
|||||||| |||||
Sbjct 2621749 ACGCTTGTACATGTTCCAC 2621731
>seq5
Length=2445035
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| |||| ||||| || | |||| |
Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | ||| || |||| ||||| ||||| || || | ||||| ||||| ||
Sbjct 1847742 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACTG 1847801
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| ||||| || || || |||| || || | | ||||||||| || ||||||
Sbjct 1847802 ATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAAAG 1847861
Query 38433 G 38433
|
Sbjct 1847862 G 1847862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172706217600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |