Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4 426 2e-114 seq2 197 2e-45 seq14 143 3e-29 >seq4 Length=3044656 Score = 426 bits (472), Expect = 2e-114 Identities = 1055/1588 (66%), Gaps = 21/1588 (1%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 || |||||| | || ||||| || || || | ||| || || ||||| || || Sbjct 1484284 TCGTCTTCAGCCTTGTACTTCTCGGCCTCAGACAGCATGCGCTCGATTTCTTCCTTAGAC 1484343 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | || || || | |||| || | Sbjct 1484344 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTCGACTTGCCAGTACCCTTCTCCACG 1484403 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| || |||| |||||||| ||||||| |||||| | || | ||| || || | Sbjct 1484404 GCAGAGACGTTCATGATACCATTGGCATCAAGATCGAATGTGACCTCAATCTGAGGAACA 1484463 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | ||||| || | | || || | || || | | |||| ||| | Sbjct 1484464 CCACGAGGAGCAGGCGGAATGCCGGAAAGCTCGAACTTGCCGAGCAGATTGTTGTCCTTG 1484523 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | ||| |||||||| ||||||| || ||| | ||||| || || Sbjct 1484524 GTACGAGCACGCTCACCTTCGTAGACTTGGATGAGCACACCCGGTTGGTTGTCGGAAAAG 1484583 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||| | | ||||| | || || || || || | | || | || ||| Sbjct 1484584 GTAGAGAAGGTCTCGGACTTCTTCGTGGGGATGGTGGTGTTCCGCTTGATGAGAGGAGTC 1484643 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | |||||| ||| |||| || |||||||| || | || || ||| || ||| Sbjct 1484644 ATGACACCACCAGCAGTCTCGATACCGAGAGACAGCGGCGCAACATC---GAGCAAGAGG 1484700 Query 6989 ---TC-TTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 || ||| | || | | | || || | | ||||| || ||||| | || Sbjct 1484701 ATTTCGTTGGTC-GACTTGGACGAGGTATCGCCAGACAGAATGGCAGCCTGGACTGCGGC 1484759 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 ||||| ||||| |||||||||||||| |||| ||| || |||| || || || || | Sbjct 1484760 ACCGTAGGCGACGGCCTCATCGGGGTTGATCGATTTGTTGGGTTCCTTGCCATTGAAGAA 1484819 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 || || | | | || || || || || || |||||||||||||| |||||||| Sbjct 1484820 GTCGGAAACAAGCTTCTGGATGCGAGGAATGCGCGTGGATCCACCGACCAAGACGATTTC 1484879 Query 7162 ATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221 | || || || |||||||| | ||| | || |||||||| ||||| Sbjct 1484880 GTGAACCGAAGACTTGTCGATCTTGGCGTCCCTCAGCACACGCTCGACAGGCTCCATTGT 1484939 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 |||||| | ||| || || || || ||||| ||||| || ||||| || ||||| Sbjct 1484940 AGAACGGAAGAGGTCTTGGCATAGCTCTTCGAAACGAGCACGAGTGATGGAGGTGTAGAA 1484999 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGT 7341 || | || || || | || ||||||||||||| || || || | || || || || Sbjct 1485000 GTCGATACCCTCATAGAGAGAGTCAATTTCAATGGACGTCTGGGCGGAAGACGACAAAGT 1485059 Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401 ||||| || ||||| || || || || | ||| ||||| ||||| | ||| | | Sbjct 1485060 GCGCTTGGCCCGCTCGCAAGCGGTGCGGAGACGTCGAAGAGCACGGGCGTTGGAGCTCAA 1485119 Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGA 7460 || ||||||||||| ||||| || || | |||||| | || || | |||| Sbjct 1485120 GTCCTTCTTATGTTTGCGTTTGAATTCCTGTACGAAGTGGTTGACCAAG-CGGTTGTCGA 1485178 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || |||||||||||||| || || || || || | |||||||| ||||| ||| | | Sbjct 1485179 AGTCCTCACCACCCAAGTGGGTGTCACCAGCAGTAGACTTGACTTCGAAGATGCCTTCCT 1485238 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | ||| | | | ||| ||||| || ||||||||||| || || |||||||| ||||| Sbjct 1485239 CGATGGTCAGGAGCGACACATCGAAGGTACCACCACCGAGATCGAAAATGAGGACGTTGC 1485298 Query 7581 TATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640 || | || | ||||| ||||||||||| || || || || || || || || || | Sbjct 1485299 GCTCACCCTCGGTCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCAGTCGGCTCGTTGA 1485358 Query 7641 TAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 | |||| || |||| || || || || || | || ||||| || ||||| || || Sbjct 1485359 TGATACGGAGGACA-TTGAGACCTGCGATCAGACCTGCGTCTTTGGTGGCTTGGCGCTGA 1485417 Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759 || ||||| || || || ||||| || ||||| |||| |||| | |||||| || Sbjct 1485418 GAGTCGTTGAAATACGCGGGGACTGTGACGACGGCGTTGTTGACGGTGCCACCGAGGTAT 1485477 Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819 || || || | ||| |||| || || || ||||| || || |||||||| | | || Sbjct 1485478 GACTCGGCAGTCTCTCTCATCTTTGTGAGGACCATTGACGAGATCTCTTCGGGTGTGAAT 1485537 Query 7820 TGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATA 7879 |||||| || || || || || |||| || | || || || | | | || Sbjct 1485538 TGTTTCTCCTCGCCTTTGAACTCGACTTGGATGACTGGCTT-GCCTC--CCTTGTCAATG 1485594 Query 7880 ACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCG 7939 ||||| | | | | ||||||||| |||| || | | || | || || | ||| Sbjct 1485595 ACCTTGAAGGGAAAGTGCTTCATATCGGCTTGAACTTCGGGATCAGCGAATTTCCGGCCG 1485654 Query 7940 ATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCC 7999 || || ||||| || || || || || || | || ||||| || ||| ||||| || Sbjct 1485655 ATCAGTCGCTTCGCGTCGAAGACGGTATTCTGAGGATTCATAGCGACTTGATTCTTGGCG 1485714 Query 8000 GCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGA 8059 || || || || ||||| || | | || ||||| ||||| | || ||||| ||||| Sbjct 1485715 GCATCACCAATGAGACGCTC---AGTGTCGGTAAAGGCGACAAAGGAGGGGGTGGTTCGG 1485771 Query 8060 TTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAA 8119 || ||||||||||| ||||| || || | |||||| | | | ||| ||| ||||| || Sbjct 1485772 TTGCCTTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCGGAAGATGCCTACGCATGAG 1485831 Query 8120 TACGTTGTTCCTAAATCAATACCGATTG 8147 || || || |||| ||| ||||| |||| Sbjct 1485832 TAGGTAGTACCTAGATCGATACCTATTG 1485859 >seq2 Length=3515922 Score = 197 bits (218), Expect = 2e-45 Identities = 375/545 (69%), Gaps = 13/545 (2%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| || || ||||| |||||||| || | | |||||| |||||||| |||| || Sbjct 2201517 CAGGTCTTCGAAACGGGCACGGGTGATCTGGGCGTTGAAATCTTCGCCGTCGAATAATGA 2201458 Query 7303 ATCAATTTCAATGGTTGTTTGTG--CCGT-CGA-AGATAACGTTCGCTTTGCGCGCTCAC 7358 || || |||| || ||||| | |||| ||| ||| |||| ||| || || || | Sbjct 2201457 GTCGATCTCAACCGTGGTTTGGGTTCCGTTCGACAGA----GTTCTCTTGGCACGTTCGC 2201402 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT-TTA 7417 | || || || | | || || ||||| | | || || || || ||||| ||| || Sbjct 2201401 AGGCGGTACGCAGTCTTCGGAGAGCACGGGCATCGCCAGACATGTCCTTCTT-TGTCTTC 2201343 Query 7418 CGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 |||| || || | |||||| |||||| | | |||||||||| ||| |||||| Sbjct 2201342 CGTTGGAATTCCTTCTTGAAGTGCTCAAGGAGGTTGGTGTCGAAATCTTGACCGCCCAAG 2201283 Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537 || || || |||||||| || ||||| |||| || || | ||||| | || || Sbjct 2201282 TGGGTGTCGCCCGCGGTGGCCTTGACGGTGAAGACGCCGCCCTGGATGTTCAGCAGGGAG 2201223 Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTG 7594 ||||| || ||||||||||| || || | ||||| ||||| || | || ||| Sbjct 2201222 ACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACGTTTCGCTCCTTTTCGGATTTC 2201163 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 | |||||||||| || ||||| || || || ||||| || || ||||| || | Sbjct 2201162 CCCGAGCCGAGACCGTAGGCAATAGCGGCGGCAGTAGGTTCGTTGATGATACGGAGGACG 2201103 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || ||||||||||| | | ||||| || || ||||||| || || || |||||| Sbjct 2201102 TTGAGGCCAGCAATGGCACCGGCATCCTTGGTGGCTTGTCTCTGGTTGTCATTGAAGTAG 2201043 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || || || || | || ||| ||||| ||||| | | || |||| || Sbjct 2201042 GCTGGGACGGTGACAACAGCTTTCGAGACCTTCTTGCCGAGCTTGGTCTCTGCGACTTCC 2200983 Query 7775 TTCAT 7779 ||||| Sbjct 2200982 TTCAT 2200978 >seq14 Length=2335262 Score = 143 bits (158), Expect = 3e-29 Identities = 240/342 (70%), Gaps = 14/342 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||||||||| ||||| || ||| | |||||||| || | ||| Sbjct 380566 TCGAAGTCCTCGCCACCCAAGTGAGTATCACCGTTGGTAGACTTGACTTCGAAAACACC- 380508 Query 7517 CCTTCA--ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 |||| || | | || || | ||| || ||||||||||| || || | || | Sbjct 380507 -CTTCTGGATCTCAAGCACTGAGATATCGAAGGTACCACCACCAAGATCGTA---GACTG 380452 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || || || |||| ||| ||||||||||| || | || || || || |||| Sbjct 380451 CGATCACGCGATCATCTTC---CTTTTCGAGACCGTAGGCAAGCGCAGCTGCGGTAGGTT 380395 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692 | || | | ||| ||| |||||||||||||| ||| | || |||||||| ||||| Sbjct 380394 CGTTGACGACACGTAGAACATTCAGGCCAGCAAT--TTGACCGGCGTCTTTCGTGGCTTG 380337 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| ||| |||||| |||||||| || || || ||||| |||| | | || ||| || Sbjct 380336 TCGCTGCATATCGTTGAAGTAGGCGGGAACTGTGACGACGGCGTTCTTAACGGGCTTGCC 380277 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 |||||| | ||| || | || ||||| |||| || ||||| Sbjct 380276 GAGATATGCTTCAGCAGTCTCCTTCATCTTGGACAGGACCAT 380235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132680912600