Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2 165 2e-35
seq5 107 4e-18
seq8 91.5 3e-13
>seq2
Length=3515922
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| | ||| || || |||||||| || || ||||| ||||| || | |||||||
Sbjct 2794247 AGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGG 2794306
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| || ||||||||||| || |||||||| | |||||| ||||| || || ||||| ||
Sbjct 2794307 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCC 2794366
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||| || || ||||||||| ||||| || || ||| ||| || || || ||
Sbjct 2794367 TTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGTGTG 2794426
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
| |||||| || |||| |||||| ||||| | ||||||
Sbjct 2794427 ATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465
Score = 158 bits (174), Expect = 3e-33
Identities = 167/220 (76%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
|||||||| || | || | ||| ||| || ||||| ||||| |||| || ||||
Sbjct 2794018 GAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCG 2794077
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| || |||||||| || |||||||| |||| || ||||| || || ||||| ||
Sbjct 2794078 GCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTC 2794137
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|||||||| || ||| ||||| || ||||||||||| || || || ||||| || ||
Sbjct 2794138 CTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAGCGT 2794197
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| |||||| || |||||||| || || || | |||||||
Sbjct 2794198 AATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Score = 127 bits (140), Expect = 5e-24
Identities = 151/201 (75%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
|| ||||| || || || ||||||||| |||| || | ||||| |||||||| |||||
Sbjct 2794724 GTCGACTCCTTCTGGATGTTGTAATCGCTCAAG-GTGCGGCCATCCTCGAGCTGTTTACC 2794782
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|||||||| || || || || || |||||||||||||| ||||| || || || |||
Sbjct 2794783 GGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTT 2794842
Query 195063 GACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119
||| || || |||||||| ||| || || || ||||| | ||||| || |||||
Sbjct 2794843 GACATTGTCGATGGTGTCGCTCGA---CTCAACCTCGAGGGTGATGGTCTTGCCGGTCAA 2794899
Query 195120 AGTTTTTACGAACACTTGCAT 195140
||| || ||||| | |||||
Sbjct 2794900 AGTCTTGACGAAGATCTGCAT 2794920
Score = 123 bits (136), Expect = 6e-23
Identities = 156/213 (73%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| || ||||| || || ||||| |||| || || | || |||||
Sbjct 2794484 ACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCA 2794543
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || || ||||| || ||||| || || || || |||||||| |||||||||
Sbjct 2794544 AGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGA 2794603
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTC 195108
|| || ||||||||| || ||||| || ||| || || ||||| |||| |||
Sbjct 2794604 ATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGA---CTCAACCTCAAGCGTAATGGTC 2794660
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || || | ||| || || || | |||||||
Sbjct 2794661 TTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
>seq5
Length=2445035
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|||||||||||||| ||| | || | || |||||||| ||||| || ||||||||
Sbjct 1847860 TTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 1847801
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
||||| || ||||| || || ||||| || |||||||| || || ||||| || ||
Sbjct 1847800 AGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 1847741
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| ||||| || ||| || || ||||| | ||||| || || | || || |||||
Sbjct 1847740 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1847682
>seq8
Length=1658097
Score = 91.5 bits (100), Expect = 3e-13
Identities = 187/278 (67%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
||||| || || ||||| | || | |||||| || | || | | || ||| |||
Sbjct 1350657 TTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAGAACCAGGAGTGG 1350716
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| |||||||| || |||| || || || || | ||||| ||||| ||||||| ||
Sbjct 1350717 ACTCTTTTCTGCCCTCATGAGGCTCCAGGTCTGGCCGATGTCTATGGCGACGAGTTCCAG 1350776
Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768
|| || || ||||| ||||||||||| | | | || ||| |||||||| |
Sbjct 1350777 GAGCTCTACGAGAGATATGAAAAAGAGGGCCGTGGCCGTCAGACCGTCAAGGCCCAGAAG 1350836
Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828
|||||| || || |||| || || ||| || | |||| || ||||||
Sbjct 1350837 CTGTGGTATGCGATTCTTGAGGCTCAGACTGAGACTGGGACTCCCTACATGCTCTACAAG 1350896
Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866
|||||| | | | ||||| |||||||||||||| ||
Sbjct 1350897 GATGCCTGCAATAGGAAGAGCAACCAGAAGAACTTGGG 1350934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481386771505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |