Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2 165 2e-35 seq5 107 4e-18 seq8 91.5 3e-13 >seq2 Length=3515922 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||| || || |||||||| || || ||||| ||||| || | ||||||| Sbjct 2794247 AGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGG 2794306 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || || ||||||||||| || |||||||| | |||||| ||||| || || ||||| || Sbjct 2794307 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCC 2794366 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || ||||||||| ||||| || || ||| ||| || || || || Sbjct 2794367 TTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGTGTG 2794426 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | |||||| || |||| |||||| ||||| | |||||| Sbjct 2794427 ATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465 Score = 158 bits (174), Expect = 3e-33 Identities = 167/220 (76%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||||| || | || | ||| ||| || ||||| ||||| |||| || |||| Sbjct 2794018 GAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCG 2794077 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| || |||||||| || |||||||| |||| || ||||| || || ||||| || Sbjct 2794078 GCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTC 2794137 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 |||||||| || ||| ||||| || ||||||||||| || || || ||||| || || Sbjct 2794138 CTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAGCGT 2794197 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || |||||| || |||||||| || || || | ||||||| Sbjct 2794198 AATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237 Score = 127 bits (140), Expect = 5e-24 Identities = 151/201 (75%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 || ||||| || || || ||||||||| |||| || | ||||| |||||||| ||||| Sbjct 2794724 GTCGACTCCTTCTGGATGTTGTAATCGCTCAAG-GTGCGGCCATCCTCGAGCTGTTTACC 2794782 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 |||||||| || || || || || |||||||||||||| ||||| || || || ||| Sbjct 2794783 GGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTT 2794842 Query 195063 GACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119 ||| || || |||||||| ||| || || || ||||| | ||||| || ||||| Sbjct 2794843 GACATTGTCGATGGTGTCGCTCGA---CTCAACCTCGAGGGTGATGGTCTTGCCGGTCAA 2794899 Query 195120 AGTTTTTACGAACACTTGCAT 195140 ||| || ||||| | ||||| Sbjct 2794900 AGTCTTGACGAAGATCTGCAT 2794920 Score = 123 bits (136), Expect = 6e-23 Identities = 156/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| || ||||| || || ||||| |||| || || | || ||||| Sbjct 2794484 ACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCA 2794543 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || ||||| || || || || |||||||| ||||||||| Sbjct 2794544 AGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGA 2794603 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || ||||||||| || ||||| || ||| || || ||||| |||| ||| Sbjct 2794604 ATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGA---CTCAACCTCAAGCGTAATGGTC 2794660 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || | ||| || || || | ||||||| Sbjct 2794661 TTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693 >seq5 Length=2445035 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 |||||||||||||| ||| | || | || |||||||| ||||| || |||||||| Sbjct 1847860 TTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 1847801 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 ||||| || ||||| || || ||||| || |||||||| || || ||||| || || Sbjct 1847800 AGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 1847741 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || ||||| || ||| || || ||||| | ||||| || || | || || ||||| Sbjct 1847740 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1847682 >seq8 Length=1658097 Score = 91.5 bits (100), Expect = 3e-13 Identities = 187/278 (67%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||| || || ||||| | || | |||||| || | || | | || ||| ||| Sbjct 1350657 TTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAGAACCAGGAGTGG 1350716 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | |||||||| || |||| || || || || | ||||| ||||| ||||||| || Sbjct 1350717 ACTCTTTTCTGCCCTCATGAGGCTCCAGGTCTGGCCGATGTCTATGGCGACGAGTTCCAG 1350776 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 || || || ||||| ||||||||||| | | | || ||| |||||||| | Sbjct 1350777 GAGCTCTACGAGAGATATGAAAAAGAGGGCCGTGGCCGTCAGACCGTCAAGGCCCAGAAG 1350836 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 |||||| || || |||| || || ||| || | |||| || |||||| Sbjct 1350837 CTGTGGTATGCGATTCTTGAGGCTCAGACTGAGACTGGGACTCCCTACATGCTCTACAAG 1350896 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866 |||||| | | | ||||| |||||||||||||| || Sbjct 1350897 GATGCCTGCAATAGGAAGAGCAACCAGAAGAACTTGGG 1350934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481386771505