Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 seq8 114 1e-20 >seq1 Length=4142182 Score = 122 bits (134), Expect = 1e-22 Identities = 219/320 (68%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 ||||||||||| || | ||||| || | | || | |||||| ||||| || | | Sbjct 2622337 CATGCAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGA 2622278 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 || |||||||| || | | || | |||||| || |||||||||||||| || ||||| Sbjct 2622277 CCTGGCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAGAAG 2622218 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 ||||| || || ||||| |||||||| |||| || | || | | || |||| | Sbjct 2622217 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAG 2622158 Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200 |||||| | || ||||| || |||||||| || || || || || || |||| || Sbjct 2622157 ATCCATCTAAGAGCCCAGTCGGCCTTCTTCCGTATGCAGGGGATGGTGTCGATAGCATCG 2622098 Query 19201 AATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260 || || || | ||| | | ||| || || |||| || || | | |||||| Sbjct 2622097 AACAGGTATGTCTTCTCTTTGGGATCCTTCACGTATGTGTCGATGAGGAGTGAGTACATC 2622038 Query 19261 TCTGAATGAATATTTTCTAT 19280 || || || ||||| || || Sbjct 2622037 TCAGAGTGGATATTCTCCAT 2622018 >seq8 Length=1658097 Score = 114 bits (126), Expect = 1e-20 Identities = 356/544 (65%), Gaps = 8/544 (1%) Strand=Plus/Minus Query 48263 TTCTTCATTGCCACTATTCCTTTTAAG-TTCAAGAAAGTCCATTATATCAGCATGCCATG 48321 |||||| ||||| ||| || | || |||| |||| || | | ||||| ||||| | Sbjct 1350638 TTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAA-TCGAAGACGTCAGCGTGCCACG 1350580 Query 48322 GTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGG 48381 | || || || || || | |||| ||||| || || || || || || | || | || Sbjct 1350579 GCTCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGG 1350520 Query 48382 CAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCG 48441 | || ||||| |||| | ||||| || | | ||||||||| | ||||||||||| | Sbjct 1350519 CCGTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGTTCCTG 1350460 Query 48442 AAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCAT 48499 |||||| ||| | || | || | | |||| | ||| || ||||| || | Sbjct 1350459 CAATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTG--AGACCGATGCCACCAGCGGT 1350402 Query 48500 TTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTAT 48559 || || || | ||||| || || || || || || || || || |||||||| | Sbjct 1350401 CTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATCCTT 1350342 Query 48560 CATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGT 48619 ||| | | | || ||| |||| || || || ||||| | ||| || | || Sbjct 1350341 CATGTCGATCAAGAAGCAAGAGGACAGCTGAGGTTGTGGTGTTCCGGCATTGAAGAGCGT 1350282 Query 48620 TGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATC 48679 || ||||||||| | || || |||| || | | || ||||| ||||| | || Sbjct 1350281 GGGTGATGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTC 1350222 Query 48680 TATATC-CCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAA 48738 ||||| || | || || || | || |||||||| | ||| | || |||| ||| Sbjct 1350221 AATATCATCACCG-TGGATGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGG 1350163 Query 48739 CAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGT 48798 | | || || ||||||| || |||||||| || || || || || ||||| || | Sbjct 1350162 CGACTTGCTTGCCGATTTTCAGCAGGTATGATTTCTCTAACGTCTTGAAGCCAAAGTATT 1350103 Query 48799 TGTA 48802 ||| Sbjct 1350102 GGTA 1350099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108694604600