Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq8 201 2e-46
seq1 93.3 8e-14
>seq8
Length=1658097
Score = 201 bits (222), Expect = 2e-46
Identities = 828/1279 (65%), Gaps = 45/1279 (4%)
Strand=Plus/Minus
Query 221406 CGCAAGACTGC-GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTC 221464
|||| || ||| || || || |||||||||||||||||||||||| |||| ||| |
Sbjct 1351308 CGCACGA-TGCAGTGAGAGCCGCGTGGTAGATGGTCTCAAAGATCTGGATGTTCAGT-TG 1351251
Query 221465 TTG-GCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTG 221523
| | ||||| ||||| ||||||| |||||| | ||| | || || || || ||
Sbjct 1351250 TCGAGCCTCTGGAGAGTCAAAGGGCAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTG 1351191
Query 221524 TACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC--GCTTCTGGCACGGGA 221581
|| || | ||||| || | |||| | | ||| | || || || || || ||
Sbjct 1351190 GACCCCAAGGCCGATAGGTCGATGTCGCATATTGCT--CTTCCTGGCCTCAGGAACCGGG 1351133
Query 221582 TAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTC 221641
|| |||||| |||||| | ||||| | || | |||| ||| | | |||||
Sbjct 1351132 TAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGGGTGACGACCTGAGTGACCTCATGA 1351073
Query 221642 AGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTT 221701
|| | | ||| | ||||||| | | ||| || ||||||| |
Sbjct 1351072 AG------GCGGCCGAAGTCATACTCGCCACGGGGTTGG------TCGACAAAAGTGGGA 1351025
Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761
|| || | | |||| || || || || ||||| || || ||| | ||||
Sbjct 1351024 AGAGCCAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGCGCTGTGAACTCGACGATC 1350965
Query 221762 TCTGTACAGAGGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGAT 221819
|| || ||||| || || ||| ||||| |||| || || || || ||| | ||
Sbjct 1350964 TCGGTGCAGAGATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTAT 1350907
Query 221820 TGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCT 221879
|| || |||||||||||||| ||||| |||||||| ||||||| | ||||||
Sbjct 1350906 TGCAGGCATCCTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCG 1350847
Query 221880 TGTCCCAGAGTTCTCTGGCGCTC-ACCGTCCTCTTGACTGCACCCTCGGTCTTTT-CATA 221937
| ||| || | ||||| || || ||| |||| || | | |||||| ||||
Sbjct 1350846 CATACCACAGCT-TCTGGGCCTTGACGGTC----TGACGGCCACGGCCCTCTTTTTCATA 1350792
Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACAC-CTGG 221996
| |||||| | |||| || || || | ||| |||| |||||| | | |
Sbjct 1350791 TCTCTCGTAGAGCTCCTGGAACTCGTCGCCATAGACATCGGCCAGACCTGGAGCCTCATG 1350732
Query 221997 CGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056
||| || | ||| |||| | || ||| | | ||| | || |||||| | ||| |||
Sbjct 1350731 AGGG-CAGAAAAGAGTCCACTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGG 1350673
Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCA 222116
|||||| || | || || || | || || || ||| ||||| ||| || ||||
Sbjct 1350672 TCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCA 1350613
Query 222117 GATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGG 222176
||| || || || || | |||||||||||||||||||| |||| ||| | ||| ||||
Sbjct 1350612 GATTCAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCGAAAGCACCGG 1350553
Query 222177 GTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCG 222236
||||||||||||| ||||| || || | || |||||| | || | | |
Sbjct 1350552 GTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGG 1350493
Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296
| | ||||| || ||| || ||||| || ||| || | || || | | |
Sbjct 1350492 GAATGAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATG- 1350434
Query 222297 TACTG-GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355
| || ||| | ||||| ||||| ||| || ||||||||||| ||| |||||||
Sbjct 1350433 CAGTGAGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGC 1350374
Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415
||||| ||||||||| || || ||||| | || | || || ||||| |||| |
Sbjct 1350373 GTGTCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGC 1350314
Query 222416 TGAGATT-TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT 222474
|||| || |||| | | ||| || || |||||||| || || || ||| | |
Sbjct 1350313 TGAGGTTGTGGT-GTTCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCACTTCTG 1350255
Query 222475 AGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT--CTGCATG 222532
||||| || | ||| ||||| | | | | | || | || ||||| || | || |
Sbjct 1350254 GGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCATCACCGTGGATGCCAACA-G 1350196
Query 222533 GCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGAC--CCTTGGAGCTGGAGAGCA 222590
| || | ||| ||||| ||| || | || | ||| |||| | | ||||
Sbjct 1350195 CCACA-CGCATAATCATGTGCTGTGGTCGTTCGGC--GACTTGCTTGCCGATTTTCAGCA 1350139
Query 222591 GGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAA 222650
|||| ||||| || | |||||||| |||||||| | | || ||||||||| | | |
Sbjct 1350138 GGTATGATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCTGTCATAGA 1350079
Query 222651 CCACGGCGGCGTCCAGCTC 222669
| | ||| | || ||| ||
Sbjct 1350078 CAATGGCCGAGTTCAGTTC 1350060
>seq1
Length=4142182
Score = 93.3 bits (102), Expect = 8e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938
|| ||||| || || || || || ||||| ||||| ||| ||| || ||||| | |||
Sbjct 2622186 CGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCTTCAATC 2622245
Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998
|||||||||||| ||||| ||||| || || |||||| || || ||||||
Sbjct 2622246 TTCTGGCTCAAGAGCAAGGGTCTGATGCCAGGTCTCACCTTTTCAAATGAACTCATCTCT 2622305
Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037
| || |||||| | |||| |||||||| ||||| |||
Sbjct 2622306 CGTGATGAGGGTATGCACACCGATTTTGCATGCCTACTC 2622344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844625841600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |