Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq13 111 5e-19 >seq13 Length=2370553 Score = 111 bits (122), Expect = 5e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| || ||||||| | | | ||| ||| |||| | || || |||| ||| || Sbjct 267867 ACAGACGTGGACGCGGAACGGATCTGATACGTCGAAAAGTCGTTCCTTAAGGAACGCCGA 267926 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 || ||||| | |||||| || ||||||||||| || ||||| || |||||||| || || Sbjct 267927 AGCGCCGTGAGCAATCATGCAGTCACGCTCCATCTCTCCGAATCGTAGACCACCGTCCCG 267986 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | ||| ||| ||||||| || || || | | | || ||| || ||| || Sbjct 267987 GGCGCGACCTTCGACAGGCTGGCGCGTCAGGATTTGCGTGGGGCCGCGGGCGCGAGAGTG 268046 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 |||||||| ||||| ||| | || ||||||||| ||| ||||| | ||||| Sbjct 268047 GATCTTATCATCAACCATGTGCCTTAGCCGCTGGTAGTATGTCGGACCCAGGAAGA 268102 Score = 89.7 bits (98), Expect = 2e-12 Identities = 92/118 (78%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 252571 GCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGAGACTGATTGTTTTCCGGGAAA 252630 || || || ||||| ||| |||||| ||||| | ||| ||||| |||| || |||||| Sbjct 269026 GCTTGTTTACCCATGGCAGACTGGTACGTATTACGGGGCGACTGGTTGTGGTCGGGGAAA 269085 Query 252631 GGAATGCATGATGCTAC-AACACCGAAGATAGTGCTTGGGTGAATTTCACAGTGACTG 252687 |||||| || || || |||||| ||||| |||| |||||||| ||||||||| || Sbjct 269086 GGAATG-ATACTGGCACAAACACCCAAGATCATGCTCGGGTGAATCTCACAGTGAGTG 269142 Score = 87.8 bits (96), Expect = 5e-12 Identities = 130/183 (71%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| || ||||| |||||||| |||||| | || || ||||||||||| || || Sbjct 284395 CTTGACTAGTCGACGTTGAATATATCCAGTTTCGGCAGTCTTGACAGCTGTATCGATAAG 284336 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAA 302702 ||| | || ||| |||| || |||||||| | ||| ||| || || | || | Sbjct 284335 ACCCTCGCGCCCAGCCATGGCGTGGAAGAAGAACTCCGTCGGGGTCAGACCACGAAGGTA 284276 Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGC---GAATCGTCGAACTTGGTAAAGTGTGG 302759 |||| ||||||||||||| | || |||| |||| ||| ||| |||||||| || Sbjct 284275 GGAGTTCTCAACGAAACCTCTCG---AGGGCGCAGAATAATCGTCCTTCGTAAAGTGAGG 284219 Query 302760 CAG 302762 || Sbjct 284218 GAG 284216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817317135055