Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq13 111 5e-19
>seq13
Length=2370553
Score = 111 bits (122), Expect = 5e-19
Identities = 166/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||| || ||||||| | | | ||| ||| |||| | || || |||| ||| ||
Sbjct 267867 ACAGACGTGGACGCGGAACGGATCTGATACGTCGAAAAGTCGTTCCTTAAGGAACGCCGA 267926
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|| ||||| | |||||| || ||||||||||| || ||||| || |||||||| || ||
Sbjct 267927 AGCGCCGTGAGCAATCATGCAGTCACGCTCCATCTCTCCGAATCGTAGACCACCGTCCCG 267986
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
|| | ||| ||| ||||||| || || || | | | || ||| || ||| ||
Sbjct 267987 GGCGCGACCTTCGACAGGCTGGCGCGTCAGGATTTGCGTGGGGCCGCGGGCGCGAGAGTG 268046
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659
|||||||| ||||| ||| | || ||||||||| ||| ||||| | |||||
Sbjct 268047 GATCTTATCATCAACCATGTGCCTTAGCCGCTGGTAGTATGTCGGACCCAGGAAGA 268102
Score = 89.7 bits (98), Expect = 2e-12
Identities = 92/118 (78%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 252571 GCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGAGACTGATTGTTTTCCGGGAAA 252630
|| || || ||||| ||| |||||| ||||| | ||| ||||| |||| || ||||||
Sbjct 269026 GCTTGTTTACCCATGGCAGACTGGTACGTATTACGGGGCGACTGGTTGTGGTCGGGGAAA 269085
Query 252631 GGAATGCATGATGCTAC-AACACCGAAGATAGTGCTTGGGTGAATTTCACAGTGACTG 252687
|||||| || || || |||||| ||||| |||| |||||||| ||||||||| ||
Sbjct 269086 GGAATG-ATACTGGCACAAACACCCAAGATCATGCTCGGGTGAATCTCACAGTGAGTG 269142
Score = 87.8 bits (96), Expect = 5e-12
Identities = 130/183 (71%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642
||||| || ||||| |||||||| |||||| | || || ||||||||||| || ||
Sbjct 284395 CTTGACTAGTCGACGTTGAATATATCCAGTTTCGGCAGTCTTGACAGCTGTATCGATAAG 284336
Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAA 302702
||| | || ||| |||| || |||||||| | ||| ||| || || | || |
Sbjct 284335 ACCCTCGCGCCCAGCCATGGCGTGGAAGAAGAACTCCGTCGGGGTCAGACCACGAAGGTA 284276
Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGC---GAATCGTCGAACTTGGTAAAGTGTGG 302759
|||| ||||||||||||| | || |||| |||| ||| ||| |||||||| ||
Sbjct 284275 GGAGTTCTCAACGAAACCTCTCG---AGGGCGCAGAATAATCGTCCTTCGTAAAGTGAGG 284219
Query 302760 CAG 302762
||
Sbjct 284218 GAG 284216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817317135055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |