Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq15 132 6e-25 seq8 132 6e-25 seq14 100 3e-15 seq1 89.7 6e-12 >seq15 Length=3402442 Score = 132 bits (146), Expect = 6e-25 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 1592120 GACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTT 1592178 |||||| | ||||||| || |||| ||| | ||||| ||| | || || ||| | Sbjct 2385098 GACATCGAGGAGTGGGACCAGAAGTTCATGC-AGGTCGATCAGGAAATGCTGTTCGAGAT 2385040 Query 1592179 GATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGT 1592238 |||||||| || ||||| ||||| |||||| | || || || |||| |||||| |||| Sbjct 2385039 CATCCTCGCAGCAAACTATCTCGATATCAAGGCCCTCCTGGACGTTGGCTGCAAGACTGT 2384980 Query 1592239 GGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTA 1592298 || |||||||||||||| ||||| || ||||||||||| || ||||||||||| || | Sbjct 2384979 CGCGAACATGATCAAGGGGAAGTCACCTGAGGAGATCCGGAAAACCTTTAACATTCAGAA 2384920 Query 1592299 CG 1592300 || Sbjct 2384919 CG 2384918 >seq8 Length=1658097 Score = 132 bits (146), Expect = 6e-25 Identities = 211/303 (70%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||||||||||||||| ||||||| ||| || || || | |||||| | ||| || || Sbjct 1350539 GCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATT 1350480 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 || || ||||| || || | |||| ||| | || || | ||| || | Sbjct 1350479 TGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTGAG 1350420 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 |||||||| || || | ||||||||| | || || |||||||||||||||||||| Sbjct 1350419 ACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCC 1350360 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 |||||| || |||||||||| | | ||||| || || || || || | || Sbjct 1350359 CTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCTGAGGTTGTGGTGT 1350300 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 ||||| |||||||||||||| | || ||||| ||| | | |||||| || ||| Sbjct 1350299 TCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTA 1350240 Query 1630362 GGT 1630364 || Sbjct 1350239 TGT 1350237 Score = 87.8 bits (96), Expect = 2e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| || | |||| ||||||| || || || ||||| || || ||| || ||||| Sbjct 1350689 CATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTT 1350630 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||||||||||||| | || | || | |||| | ||| |||||||||||||||| ||| Sbjct 1350629 GCCGTGGTTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTA 1350570 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 | ||| || || || |||||| |||||| Sbjct 1350569 GATGGCGAAAGCACCGGGTCGCTTGTTGCCGCC 1350537 >seq14 Length=2335262 Score = 100 bits (110), Expect = 3e-15 Identities = 201/295 (68%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 1572455 ATCTTTTCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCG 1572514 ||| | || | || |||||| ||||| || | ||| ||||| | ||| ||||| Sbjct 1742314 ATCCTCTCCAGGACCAACTGCGCGATCCGATCGCCGCGTTGGACCTGGAAATCGACGTCG 1742255 Query 1572515 GTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCG 1572574 | |||||||| |||| || ||||||||||| |||||||| |||||||| || ||| Sbjct 1742254 GAATGGTTGAACAGCAACACCTTGACCTCGCCGCGGTAGTCGGCGTCGATGACCCCCGCG 1742195 Query 1572575 CCGACGTCGAT---GCCCCTGACGGCCAGGGACGAGCGCGGCGCCACGCGCCCATAGTAG 1572631 || |||||| | | || | |||||| ||| || ||||| | || || || | Sbjct 1742194 CCCGTGTCGATGAAGTGCTTGGCCGCCAGGCCCGACCGGGGCGCGATCCGGCCGTACGTG 1742135 Query 1572632 CCCGCGGGTATGGCCACGGCCAGACCGGTGCGCACCTGCGCGCGGCCGCGTGCCGGCACG 1572691 ||| |||| |||| | || || | || ||| |||| ||| || | ||| | | Sbjct 1742134 CCCTCGGGCGTGGCGATCGCGAGGTCCGTCGACACGAGCGCCTTGCCCCGCGACGGGATG 1742075 Query 1572692 GTCGTC-GTCCCGACAGCCCACAGATCGTATCCGGCGGCGCCTGGCGTGCCGCGC 1572745 |||||| || |||| || ||| ||||| ||||| ||| | || ||||||| Sbjct 1742074 GTCGTCGGTTTCGAC-GCGTACATGTCGTAGCCGGCCGCGAAGGCCGAGCCGCGC 1742021 >seq1 Length=4142182 Score = 89.7 bits (98), Expect = 6e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||| ||||||||||||||||| ||||||||||||||||| | ||||||||| | Sbjct 2622511 AGCAAACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTAGAGTTCATGCCCAGC 2622452 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 | | || || |||| ||| | | |||||||| || || |||| || ||||||||| Sbjct 2622451 AAGCCGACAGGGAGCGCCTCAGTTAGGAACTCTTTTTCAATAGCGACTGCTTCGACGATG 2622392 Query 868931 ATCT 868934 | || Sbjct 2622391 ACCT 2622388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107137969029755