Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 8e-16
>seq2
Length=3515922
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| ||||| |||||||| ||||| ||| |||| ||| | |
Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||| ||||| |||||| | || |||||
Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2794801
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | || ||||||||||| ||||||| | | || || |||||||||
Sbjct 2794800 CAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACAAC 2794741
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|| || || || || || |||||| |||| | | || ||||| ||||
Sbjct 2794740 ATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTCCGAGGTGGAA 2794692
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTG 110330
||||||||| |||||||| ||||| || ||||| || ||||| | ||| ||| ||
Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
| || || | | | | || ||| ||||| ||||| || ||| | || || |
Sbjct 2794177 A-GACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACC 2794119
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
| || ||||| || | || || || ||||| ||||||| | |||| || | || ||||
Sbjct 2794118 AGCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACA 2794059
Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||||| || || || ||||| ||||| | ||||| || || ||
Sbjct 2794058 ACATTCAGAAGGAGAGCACCTTGCATTTGGTGCTGAGACTCCGTGGCGG 2794010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841524527395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |