Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 122 1e-21 seq15 114 2e-19 seq1 109 9e-18 >seq8 Length=1658097 Score = 122 bits (134), Expect = 1e-21 Identities = 202/292 (69%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||||||||| ||||| ||||||| ||| || || || | |||||| | || || || Sbjct 1350539 GCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATT 1350480 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 || || ||||| || || | |||| ||| | || || | ||| || | Sbjct 1350479 TGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTGAG 1350420 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 |||||||| || || | ||||||||| | || || | || ||||| ||||||||||| Sbjct 1350419 ACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCC 1350360 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 |||||| || |||||||||| | || ||||| || || || || | | || Sbjct 1350359 CTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCTGAGGTTGTGGTGT 1350300 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATG 2073828 |||||||||||||||||||| | || ||| | ||| ||||||||| Sbjct 1350299 TCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCACTTCTGGGACATG 1350248 Score = 93.3 bits (102), Expect = 7e-13 Identities = 286/446 (64%), Gaps = 12/446 (3%) Strand=Plus/Minus Query 2071573 AACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGT 2071630 |||| ||||| ||||||||| || || | | ||| ||||||||| ||||| ||||| Sbjct 1350976 AACTCGACGATCTCGGTGCAGAGATTTGAG--CTTCGAATGGTGCCCAAGTTCTTCTGGT 1350919 Query 2071631 TGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCG 2071690 |||| || ||| ||| ||||||| ||||||||||| | || ||||| |||| | Sbjct 1350918 TGCTCTTCCTATTGCAGGCATCCTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAG 1350859 Query 2071691 CCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCC 2071746 || | || || |||| | || |||| || | || || |||||| Sbjct 1350858 CCTCAAGAATCGCATACCACA----GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCC 1350803 Query 2071747 TNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCG 2071806 | |||| | | || || |||| | | ||| ||| || Sbjct 1350802 TCTTTTTCATATCTCTCGTAGAGCTCCTGGAACTCGTCGCCATAGACATCGGCCAGACCT 1350743 Query 2071807 GGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAAC 2071866 || ||||| ||||| || || | ||| || | || | || || ||| ||| Sbjct 1350742 GGAGCCTCATGAGGGCAGAAAAGAGTCCACTCCTGGTTCTTCTCGACACGCTCCATGAAC 1350683 Query 2071867 AGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGG 2071926 | ||| ||||||| | || || || || || || ||| || |||||||||||| Sbjct 1350682 AAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGG 1350623 Query 2071927 TTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCA 2071986 |||||| |||| | || | |||| || ||| |||||||||||||||| |||| ||| Sbjct 1350622 TTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCG 1350563 Query 2071987 AAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || || || |||||| |||||| Sbjct 1350562 AAAGCACCGGGTCGCTTGTTGCCGCC 1350537 >seq15 Length=3402442 Score = 114 bits (126), Expect = 2e-19 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 || || ||| | |||||||| || ||||| ||||| |||||| ||||||| || | || Sbjct 2385050 CTGTTCGAGATCATCCTCGCAGCAAACTATCTCGATATCAAGGCCCTCCTGGACGTTGGC 2384991 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||| || || ||| | |||||||| ||||| || ||||| ||||| || |||||| Sbjct 2384990 TGCAAGACTGTCGCGAACATGATCAAGGGGAAGTCACCTGAGGAGATCCGGAAAACCTTT 2384931 Query 2035749 AACATCAAGTACG 2035761 ||||| || ||| Sbjct 2384930 AACATTCAGAACG 2384918 >seq1 Length=4142182 Score = 109 bits (120), Expect = 9e-18 Identities = 217/319 (68%), Gaps = 7/319 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| ||| | ||| || |||| ||| || ||||| || || | Sbjct 2622317 ACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCTGGCATCAGACCCTTGCT 2622258 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTG--CCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 ||||||||| ||||| | | | || || || ||||| ||||| ||||||||||| || Sbjct 2622257 CTTGAGCCAGAAGATTGAA--GCAAATGATCCGGAGAAGAAGATACCCTCGACGGCTGCG 2622200 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517 || | || || || | || |||||| | ||| | |||||| | | ||| Sbjct 2622199 AAAGCAACCAGTCGTTGAGCGAAAGTGGACT---CCTTATCAGAGATCCATCTAAGAGCC 2622143 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || || ||||| |||| | |||| | |||||||| || || |||| |||| Sbjct 2622142 CAGTCGGCCTTCTTCCGTATGCAGGGGATGGTGTCGATAGCATCGAACAGGTATGTCTTC 2622083 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || || ||||| ||||| |||||||||||||| ||||| |||| |||||||| || Sbjct 2622082 TCTTTGGGATCCTTCACGTATGTGTCGATGAGGAGTGAGTACATCTCAGAGTGGATATTC 2622023 Query 794638 TCGATGGCGATCTGGAAGC 794656 || || || ||||||| Sbjct 2622022 TCCATCATGACTTGGAAGC 2622004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244804381585