Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2 127 1e-24 seq4 102 5e-17 seq5 95.1 8e-15 >seq2 Length=3515922 Score = 127 bits (140), Expect = 1e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| |||| || | ||||||||||||||||||||| ||||| || || | || || Sbjct 2794022 CTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCA 2794081 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || ||||| || ||||||||||||| |||||||| | || | ||||||||| Sbjct 2794082 TCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTG 2794141 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || ||| |||||| | || | || | |||||| || | || || Sbjct 2794142 TCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAGCGTAATC 2794201 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| | ||||| |||||||| ||||| Sbjct 2794202 GTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || ||||| ||||| ||||| || ||| |||| | || || |||||||||||||| ||| Sbjct 2794502 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAG 2794561 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| |||||||| || | || | || |||||||| | || || |||||| Sbjct 2794562 ATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTG 2794621 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | | ||| || |||| || |||||||| || || || ||||| ||| Sbjct 2794622 TCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACA 2794681 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 2794682 AAAATTTGCAT 2794692 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || || | || | || || || ||||| ||||||||| Sbjct 2794274 TCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 2794333 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | ||||||||||| | || || |||||| Sbjct 2794334 ATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTG 2794393 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || | ||||| || | || || ||||| || || || || || || Sbjct 2794394 TCAATCGTATCTGAAGATTCGACCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACG 2794453 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 2794454 AAGATCTGCAT 2794464 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/225 (69%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||||||||| ||||| || || | | |||| |||| Sbjct 2794709 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCATCC 2794768 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||||||||| || || ||||| || | || | || |||||||| Sbjct 2794769 TCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 2794828 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || | | ||| || || | ||| || Sbjct 2794829 TGGATCTTGCTCTTGAC--AT--TGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGAT 2794884 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGGA 34986 |||||| || || | ||||| || |||||||||||| | | ||| Sbjct 2794885 GGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATGGTCGCGGA 2794929 >seq4 Length=3044656 Score = 102 bits (112), Expect = 5e-17 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || ||||||||||||||||| ||||||||| | ||| |||||| | || |||| | Sbjct 2776722 CTGAGGACCAGGTGAATGGTCGACTCCTTCTGGACGTTGTAGTCCAAAAGCGTGCGGCCG 2776663 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || |||||||| |||||||||||||| ||||||||||| Sbjct 2776662 TCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTC 2776622 >seq5 Length=2445035 Score = 95.1 bits (104), Expect = 8e-15 Identities = 113/151 (75%), Gaps = 8/151 (5%) Strand=Plus/Minus Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || |||||||| ||||||||||||||||| |||||||| | || | ||||||||| Sbjct 1847827 TCTTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTG 1847768 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938 || | || || |||||| || | ||||| || || ||||| || | ||| Sbjct 1847767 TCTTGGATCTTGGATTTGAC--AT--TGTCGATTGTGTCTGAGGATTCGACCTCGAGGGT 1847712 Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 |||||||| |||||||||||||| || ||| Sbjct 1847711 GATGGTCTTGCCCGTGAGGGTCTTGACGAAG 1847681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692740459285