Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 1e-24
seq4 102 5e-17
seq5 95.1 8e-15
>seq2
Length=3515922
Score = 127 bits (140), Expect = 1e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| |||| || | ||||||||||||||||||||| ||||| || || | || ||
Sbjct 2794022 CTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCA 2794081
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || || ||||| || ||||||||||||| |||||||| | || | |||||||||
Sbjct 2794082 TCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTG 2794141
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || ||| |||||| | || | || | |||||| || | || ||
Sbjct 2794142 TCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAGCGTAATC 2794201
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| | ||||| |||||||| |||||
Sbjct 2794202 GTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| ||||| ||||| ||||| || ||| |||| | || || |||||||||||||| |||
Sbjct 2794502 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAG 2794561
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
||||| |||||||| || | || | || |||||||| | || || ||||||
Sbjct 2794562 ATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTG 2794621
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | || | | ||| || |||| || |||||||| || || || ||||| |||
Sbjct 2794622 TCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACA 2794681
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 2794682 AAAATTTGCAT 2794692
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| ||||| || || | || | || || || ||||| |||||||||
Sbjct 2794274 TCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 2794333
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| |||||||||||| | || | ||||||||||| | || || ||||||
Sbjct 2794334 ATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTG 2794393
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || | ||||| || | || || ||||| || || || || || ||
Sbjct 2794394 TCAATCGTATCTGAAGATTCGACCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACG 2794453
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 2794454 AAGATCTGCAT 2794464
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/225 (69%), Gaps = 8/225 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| || || | | |||| ||||
Sbjct 2794709 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCATCC 2794768
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || || ||||||||||| || || ||||| || | || | || ||||||||
Sbjct 2794769 TCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 2794828
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | | ||| || || | ||| ||
Sbjct 2794829 TGGATCTTGCTCTTGAC--AT--TGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGAT 2794884
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGGA 34986
|||||| || || | ||||| || |||||||||||| | | |||
Sbjct 2794885 GGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATGGTCGCGGA 2794929
>seq4
Length=3044656
Score = 102 bits (112), Expect = 5e-17
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| ||||||||||||||||| ||||||||| | ||| |||||| | || |||| |
Sbjct 2776722 CTGAGGACCAGGTGAATGGTCGACTCCTTCTGGACGTTGTAGTCCAAAAGCGTGCGGCCG 2776663
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
|| || |||||||| |||||||||||||| |||||||||||
Sbjct 2776662 TCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTC 2776622
>seq5
Length=2445035
Score = 95.1 bits (104), Expect = 8e-15
Identities = 113/151 (75%), Gaps = 8/151 (5%)
Strand=Plus/Minus
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || |||||||| ||||||||||||||||| |||||||| | || | |||||||||
Sbjct 1847827 TCTTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTG 1847768
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938
|| | || || |||||| || | ||||| || || ||||| || | |||
Sbjct 1847767 TCTTGGATCTTGGATTTGAC--AT--TGTCGATTGTGTCTGAGGATTCGACCTCGAGGGT 1847712
Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969
|||||||| |||||||||||||| || |||
Sbjct 1847711 GATGGTCTTGCCCGTGAGGGTCTTGACGAAG 1847681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692740459285
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