Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2 107 1e-18 >seq2 Length=3515922 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 |||||||||||| | ||| || || |||||||| || || | | || || ||| Sbjct 2794024 CAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATC 2794083 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || || || |||||||| | |||| ||| ||||| || || || || ||||| ||||| Sbjct 2794084 CTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTC 2794143 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 ||| | ||| ||||||| | || | ||||| || || ||||| || || || || Sbjct 2794144 TTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAGCGTAATCGT 2794203 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || || || || ||||| || |||||| Sbjct 2794204 CTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || || |||||||| || ||||| || || | | |||||| Sbjct 2794477 ACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 2794536 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || ||||| || || ||| | |||| | |||||||||||| || || || || || Sbjct 2794537 GTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTT 2794596 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||||| | || | || || || || ||||| || | Sbjct 2794597 GTCTTG-AATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAACCTCAAGCGTAA 2794655 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || |||||||| | || || ||||| || |||||| Sbjct 2794656 TGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219129577115