Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 1e-18
>seq2
Length=3515922
Score = 107 bits (118), Expect = 1e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|||||||||||| | ||| || || |||||||| || || | | || || |||
Sbjct 2794024 CAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATC 2794083
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| || || |||||||| | |||| ||| ||||| || || || || ||||| |||||
Sbjct 2794084 CTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTC 2794143
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
||| | ||| ||||||| | || | ||||| || || ||||| || || || ||
Sbjct 2794144 TTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAGCGTAATCGT 2794203
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||| || || || || ||||| || ||||||
Sbjct 2794204 CTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Score = 89.7 bits (98), Expect = 4e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||| || || |||||||| || ||||| || || | | ||||||
Sbjct 2794477 ACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 2794536
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || ||||| || || ||| | |||| | |||||||||||| || || || || ||
Sbjct 2794537 GTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTT 2794596
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | ||||| | || | || || || || ||||| || |
Sbjct 2794597 GTCTTG-AATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAACCTCAAGCGTAA 2794655
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
| || |||||||| | || || ||||| || ||||||
Sbjct 2794656 TGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219129577115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |