Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2 134 3e-26 >seq2 Length=3515922 Score = 134 bits (148), Expect = 3e-26 Identities = 162/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | || ||||| ||||||||||| || || || || || || | | || Sbjct 2794477 ACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 2794536 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| ||||| ||||| |||||||| || | ||| ||||| || || || |||||||| Sbjct 2794537 GTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTT 2794596 Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773 ||||||||| ||||| || || || || || ||||| | | || || || | || | Sbjct 2794597 GTCTTGAATC-TTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAACCTCAAGCGTAA 2794655 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | |||||||| || | ||||| ||||| || |||||| Sbjct 2794656 TGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693 Score = 129 bits (142), Expect = 1e-24 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 || ||||| || || || || || || ||| || || || || || || ||||| ||| Sbjct 2794046 TCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 2794105 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || ||||| || || || || || || || ||||| ||||| ||||||| ||| ||||| Sbjct 2794106 ATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTG 2794165 Query 82740 TCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 ||||| || || | || | || ||||||| || ||||||||||| ||||| ||||| || Sbjct 2794166 TCAATGGTGTC-TGAGCTCTCGACTTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGAC 2794224 Query 82799 AAATATCTGCATT 82811 ||| || |||||| Sbjct 2794225 AAAGATTTGCATT 2794237 Score = 127 bits (140), Expect = 4e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| | || ||||| ||||| ||||| || || || || || ||| ||| ||||| Sbjct 2794253 AGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGGCCGTCC 2794312 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || || || || || ||||| | || ||| || || || || || || ||||| ||| Sbjct 2794313 TCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCT 2794372 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| | || || || ||||||||||| || ||| || || | || |||||| Sbjct 2794373 TGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGTGTGATCGTC 2794432 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| |||| || || || || ||||||||| Sbjct 2794433 TTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827011305085