Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 3e-26
>seq2
Length=3515922
Score = 134 bits (148), Expect = 3e-26
Identities = 162/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | || ||||| ||||||||||| || || || || || || | | ||
Sbjct 2794477 ACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 2794536
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| ||||| ||||| |||||||| || | ||| ||||| || || || ||||||||
Sbjct 2794537 GTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTT 2794596
Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
||||||||| ||||| || || || || || ||||| | | || || || | || |
Sbjct 2794597 GTCTTGAATC-TTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAACCTCAAGCGTAA 2794655
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| |||||||| || | ||||| ||||| || ||||||
Sbjct 2794656 TGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
Score = 129 bits (142), Expect = 1e-24
Identities = 146/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679
|| ||||| || || || || || || ||| || || || || || || ||||| |||
Sbjct 2794046 TCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 2794105
Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739
|| ||||| || || || || || || || ||||| ||||| ||||||| ||| |||||
Sbjct 2794106 ATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTG 2794165
Query 82740 TCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798
||||| || || | || | || ||||||| || ||||||||||| ||||| ||||| ||
Sbjct 2794166 TCAATGGTGTC-TGAGCTCTCGACTTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGAC 2794224
Query 82799 AAATATCTGCATT 82811
||| || ||||||
Sbjct 2794225 AAAGATTTGCATT 2794237
Score = 127 bits (140), Expect = 4e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
||||| | || ||||| ||||| ||||| || || || || || ||| ||| |||||
Sbjct 2794253 AGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGGCCGTCC 2794312
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || || || || || ||||| | || ||| || || || || || || ||||| |||
Sbjct 2794313 TCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCT 2794372
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| ||||| | || || || ||||||||||| || ||| || || | || ||||||
Sbjct 2794373 TGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGTGTGATCGTC 2794432
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| |||| || || || || |||||||||
Sbjct 2794433 TTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981827011305085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |