Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq8 176 4e-39 seq2 154 1e-32 seq5 105 6e-18 >seq8 Length=1658097 Score = 176 bits (194), Expect = 4e-39 Identities = 1101/1741 (63%), Gaps = 43/1741 (2%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GTCGCTTTA 148110 || ||| |||||| ||||| || || || || || ||||| | | || ||| | || Sbjct 1351795 GATTGGGACTGGTCGATGAAGGCTCCCCGATCGGCTGCCATCTGGAGGATAGTC-CGTTG 1351737 Query 148111 TCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGC 148170 || || |||||| | ||||||||||| |||||| | | || ||| | ||| Sbjct 1351736 GCTG-ATTTCCCAGACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATGTTGGGAATGT 1351678 Query 148171 GCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGA 148230 ||| ||||| || | | || | || | || ||| | ||| | | || | Sbjct 1351677 TCTGAACCGAACCACCCTCGGCGATGATACGGTTCTTCATGTTGTCTGACCAGAGACCAA 1351618 Query 148231 GCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGC 148290 | |||| ||| || | | || | | || || ||||| ||||| || || || || | Sbjct 1351617 GGTCGACCAGATCCTTCAAGAGCCATGGGTTGACGACCTGGAACTCACCAGCCAGGACAC 1351558 Query 148291 GCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCG 148350 | || || | |||| ||| | || || || | ||||||||||||| ||||| | Sbjct 1351557 GACGGGAGTAGATGTTGGAAGTATATGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGGG 1351498 Query 148351 CGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTA 148410 ||| | || || ||||| || || || || |||||||| | ||| |||| | Sbjct 1351497 AGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCAT-ATTTGGCA 1351439 Query 148411 TTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 | | |||| || | |||| ||||| || || || || || ||||||||||| Sbjct 1351438 ATGTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCGGATGGGGTGACATTCCACATGTCA 1351379 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||| |||||||| | | |||||||||||||| | || | || ||| | Sbjct 1351378 TACTGGAGAATGCCTTGTGAGACTGGGCTGCCCTCGTATGTCTCATATGTGCCTTGCTCT 1351319 Query 148530 GCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTG 148589 || |||||||| || ||| || ||| ||| || ||||| || || || Sbjct 1351318 TTTGCAAGTTCGCACGATGCAGTGAGAGCCGCGTGGTAGATGGTCTCAAAGATCTGGATG 1351259 Query 148590 TTGAGCAGCGCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGC 148648 || || | ||| || | || | |||| |||||| | || || || || Sbjct 1351258 TTCAGTTGTCGAGCCT-CTGGAGAGTCAAAGGGCAGACGCAGAGCAAGGAAGGCATCTGC 1351200 Query 148649 AAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC 148708 ||| || || || || | ||| || || || ||| || ||| | || ||| Sbjct 1351199 AAGACCTTGGACCCCAAGGCCGATAGGTCGATGTCGCATATTGCTCTTCCTGGC-CTCAG 1351141 Query 148709 GAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAA 148767 || | || |||| |||| ||||||||| |||| | |||||| || |||| || | Sbjct 1351140 GAACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGGGTGACGACCTGAGTGA 1351081 Query 148768 T-TC-TGC--GCAGC--AATTCAAAATCGT-ACTTG--TCATCTACGATGCATCGGTTCA 148818 || || || || || ||| | ||| || | | || || | | || | Sbjct 1351080 CCTCATGAAGGCGGCCGAAGTCATACTCGCCACGGGGTTGGTCGACAAAAG-TGGGAAGA 1351022 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 || | || || | |||||| || || |||||| || || || |||| ||||||| Sbjct 1351021 --GCCAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGCGCTGTGAACTCGACGATCT 1350964 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 ||| ||| ||||| || | || ||||| |||||| || |||||||| || |||| Sbjct 1350963 CGGTGCAGAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGC 1350904 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACC 148998 | || |||||||| |||||||| || ||||| || ||| | || | ||| | Sbjct 1350903 AGGCATCCTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAGCCTCAA----GAATC 1350848 Query 148999 G-ATGC---AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAA 149054 | || | || | ||| || || ||| | || ||||| | || ||| Sbjct 1350847 GCATACCACAGCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCTTTTTCATATCTC 1350788 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 || ||| || |||| | ||||| ||| |||| | ||||| || || || ||| Sbjct 1350787 TCGTAGAGCTCCTGGAACTCGTCGCCATAGACATCGGCCAGACCTGGAGCCTCATGAGGG 1350728 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 || | || | |||| | || | | || |||| ||| |||| || || ||| Sbjct 1350727 CAGAAAAGAGTCCACTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCAC 1350668 Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTG 149234 | || || | ||||| || || | ||||| ||| ||| | ||| || Sbjct 1350667 ATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATTC 1350608 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | ||| | ||| |||||||||||||| | ||| | |||| || || ||| Sbjct 1350607 AGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCGC 1350548 Query 149295 TTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||| |||||||||||||||| ||| || ||||||| || || || | ||| || | Sbjct 1350547 TTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGG---A 1350491 Query 149352 ATG---CCACTGGCAGTGCCGTTAGTAGA-GCTA-ATGCGACTGCCGCGCGCTCGCACTT 149406 ||| ||| | | || || || || || | || || ||| || || | Sbjct 1350490 ATGAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGA--GCCAGTTGCACGAATGC 1350433 Query 149407 TGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCG 149466 ||| | |||| |||||||| || || ||| ||||| || ||| ||||| Sbjct 1350432 AGTGAGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCG 1350373 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | |||||||||||||||||| || ||||||| | || ||||| ||| ||| | Sbjct 1350372 TGTCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCT 1350313 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGC 149586 | || | || ||||| ||| | ||||| || || || || | |||||| Sbjct 1350312 GAGGTTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCACTTCTGGG 1350253 Query 149587 TCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646 ||| | | ||| | ||| | | || || ||||| || |||||||| | || | Sbjct 1350252 ACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCATCACCGTGGATGCCAACAGCCA 1350193 Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGC 149706 | ||||| | ||| ||||| ||||| || || |||| || || ||||| |||| ||| Sbjct 1350192 CACGCATAATCATGTGCTGTGGTCGTTCGGCGACTTGCTTGCCGATTTTCAGCAGGTATG 1350133 Query 149707 CGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGG 149766 || |||| |||||| |||||||||| | ||||| ||||| | | | | | |||||| Sbjct 1350132 ATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGG 1350073 Query 149767 C 149767 | Sbjct 1350072 C 1350072 >seq2 Length=3515922 Score = 154 bits (170), Expect = 1e-32 Identities = 161/209 (77%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || |||||||||| || ||| | | | |||||||| Sbjct 2794715 AAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCA-TCCTCGAG 2794773 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| | ||||| |||||||| || ||||| |||||||||||||| ||| Sbjct 2794774 CTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGAT 2794833 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||| | | ||| || |||| ||||| ||| ||||| Sbjct 2794834 CTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCC 2794893 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGG 133662 ||||| ||| || ||||| |||||||||| Sbjct 2794894 GGTCAAAGTCTTGACGAAGATCTGCATGG 2794922 Score = 114 bits (126), Expect = 1e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || | || |||||||| || |||||||| ||||| Sbjct 2794309 GTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTT 2794368 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | |||| ||| || | | || || || | |||| Sbjct 2794369 GTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGTGTGAT 2794428 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||||||||||||||| ||||| |||||||| Sbjct 2794429 CGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCAT 2794464 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||| ||| ||||| || ||||| ||| || ||| | | | ||||| || Sbjct 2794031 AAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCA-TCCTCAAG 2794089 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || || | |||||||||||| |||||||| |||||||| ||| Sbjct 2794090 CTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGAT 2794149 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| |||| | |||| ||||| | | ||| || || | || | || ||||| Sbjct 2794150 CTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAGCGTAATCGTCTTGCC 2794209 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || || || || ||||| Sbjct 2794210 CGTCAAAGTCTTGACAAAGATTTGCAT 2794236 >seq5 Length=2445035 Score = 105 bits (116), Expect = 6e-18 Identities = 133/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCGTAAA 133530 || || |||||||| |||| || ||| ||| ||| ||||| |||||||| ||| | | Sbjct 1847860 TTTTGAATATTGTAGTCGCTCAACGT--ACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 1847803 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | || ||||||||||| || |||||||| |||||||| |||||| |||| | | Sbjct 1847802 TCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 1847743 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | ||||| | || || || |||| ||||| ||| ||||| || || || || |||| Sbjct 1847742 CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1847683 Query 133651 A 133651 | Sbjct 1847682 A 1847682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420709358600