Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 >seq2 Length=3515922 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | || | ||| ||||| ||||| || |||||||| |||||| Sbjct 2794466 CCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAG 2794525 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| || | ||| ||||||||||| |||| ||| |||||||| | || Sbjct 2794526 AGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGG 2794585 Query 33643 ACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| || || || || | ||| | ||| ||||| || || | Sbjct 2794586 ATGCCTTCCTTGTCTTGAATCTTGCTCTT--GACGTTGTCGATGGTATCGCTCGACTCAA 2794643 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||| || || || || || | || || ||||| || ||||| Sbjct 2794644 CCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | ||| | ||||| || | || ||| || || |||||||||||| Sbjct 2794694 CCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTC 2794753 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| | || || | ||||| ||||| || || | ||||||||||| | || Sbjct 2794754 AAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGA 2794813 Query 33643 ACACCTTCTTTGT-CGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| |||| | | | || || || |||| ||| | ||||||||| || || | Sbjct 2794814 ATGCCTTCCTTGTCCTGGATCTTGCTCTT--GACATTGTCGATGGTGTCGCTCGACTCAA 2794871 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | || | ||||| || || || || || || || || ||||||||||| || Sbjct 2794872 CCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATGGT 2794923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703939908800