Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq8 156 6e-32
seq1 96.9 5e-14
>seq8
Length=1658097
Score = 156 bits (172), Expect = 6e-32
Identities = 212/293 (72%), Gaps = 2/293 (1%)
Strand=Plus/Plus
Query 259894 CATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952
|||||| ||| ||| ||||| ||| || | ||||||||||| |||||||| || || |
Sbjct 1350248 CATGTCCCAGAAGTGCTTCAC-TCATGCATCACCCACGCTCTTCAATGCCGGAACACCAC 1350306
Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012
|| ||| || || ||||| || | |||||||||| ||| |||||||||||||
Sbjct 1350307 AACCTCAGCTGTCCTCTTGCTTCTTGATCGACATGAAGGATGATAGCATCGAGGGCATCT 1350366
Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072
| |||||||||||| || || | ||||||||| | || || ||||||||| | |
Sbjct 1350367 ACGACACGCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGTGGCATCGGTCTCAATG 1350426
Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132
| ||| | || || | ||| |||| | || || ||||| || || || || |
Sbjct 1350427 CTCACTGCATTCGTGCAACTGGCTCCTATATTGCAGGAACCAATGGGACATCAAATGGAC 1350486
Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185
| | |||||| | || ||||| ||| ||||||| ||||||||||||||| ||
Sbjct 1350487 TCATTCCCATGTTGCGTGTTTTCAACAACACGGCCCGCTACGTCGACCAGGGC 1350539
Score = 91.5 bits (100), Expect = 2e-12
Identities = 292/451 (65%), Gaps = 16/451 (4%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|||||| |||||| || || || ||| |||| |||| ||||||||||| ||| ||
Sbjct 1350537 GGCGGCAACAAGCGACCCGGTGCTTTCGCCATCTACTTGGAGCCGTGGCACGCTGACGTC 1350596
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| | | ||| | || | ||||||||||||||||| || | ||| || || |
Sbjct 1350597 TTCGATTTCCTGAATCTGAGAAAGAACCACGGCAAGGAAGAAGT----CCGTGCCCGTG- 1350651
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
| || || || | ||||||| ||| |||| ||| || | | || ||
Sbjct 1350652 -ACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAGAACCAG 1350710
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|| ||| | || || ||||| ||||| || || ||| ||| |||||||| |
Sbjct 1350711 GAGTGGACTCTTTTCTGCCCTCATGAGGCTCCAGGTCTGGCCGATGTCTATGGCGACGAG 1350770
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084
|| | | ||||| ||| || ||||||| | ||
Sbjct 1350771 TTCCAGGAGCTCTACGAGAGATATGAAAAAGAGGGCCGTGGCCGTCAGACCGTCAAGGCC 1350830
Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144
|| || || | |||| || ||| | | ||| || | ||||| || || |||||||||
Sbjct 1350831 -CA-GA-AGCTGTGGTATGCGATTCTTGAGGCTCAGACTGAGACTGGGACTCCCTACATG 1350887
Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202
|||||||||| ||| ||| || ||||||||| ||||| ||||||||| ||| ||
Sbjct 1350888 CTCTACAAGGATGCCTGCAATAGGAAGAGCAACCAGAAGAACTTGGGCACCATTCGA-AG 1350946
Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTT 262233
| || || ||||||||||||||| ||||
Sbjct 1350947 CT-CAAATCTCTGCACCGAGATCGTCGAGTT 1350976
>seq1
Length=4142182
Score = 96.9 bits (106), Expect = 5e-14
Identities = 188/271 (69%), Gaps = 15/271 (6%)
Strand=Plus/Plus
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || || ||||||||||| | ||||| ||||| |||||||| ||||| ||||| ||
Sbjct 2622018 ATGGAGAATATCCACTCTGAGATGTACTCACTCCTCATCGACACATACGTGAAGGATCCC 2622077
Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131
|||||| |||| || || |||||||| | || | | |||| ||||||
Sbjct 2622078 AAAGAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATACGGAAGAAGGCC 2622137
Query 1456132 GACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTT-GCCGAGCGGCTC 1456187
|||||||| | | |||||| | |||||| || |||||| || | || ||
Sbjct 2622138 GACTGGGCTCTTAGATGGATCTCTGATAAGGAG----TC--CACTTTCGCTCAACGACTG 2622191
Query 1456188 GTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGG--CAGTTTCTGCGCCATCTTTT 1456244
|| | || || | ||||||||| ||||| ||||| || || || || | ||||| |
Sbjct 2622192 GTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCT--TCAATCTTCT 2622249
Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||| || || ||||| |||||
Sbjct 2622250 GGCTCAAGAGCAAGGGTCTGATGCCAGGTCT 2622280
Score = 86.0 bits (94), Expect = 9e-11
Identities = 98/129 (76%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577
|| || |||||||||| || |||| || || |||||||| | | ||| |||| || |
Sbjct 2622385 AGAAGGTCATCGTCGAAGCAGTCGCTATTGAAAAAGAGTTCCTAACTGAGGCGCTCCCTG 2622444
Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637
| | | | ||||||||| | | |||||||||||||||||||| | |||||||||||
Sbjct 2622445 TCGGCTTGCTGGGCATGAACTCTAA-GCTCATGTGCCAGTACATTG-AGTTTGTCGCCGA 2622502
Query 1456638 CCGCCTGCT 1456646
||| ||||
Sbjct 2622503 CCGTTTGCT 2622511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177809753222430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |