Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 >seq2 Length=3515922 Score = 140 bits (154), Expect = 3e-28 Identities = 171/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | |||| ||||||||| || || |||||||| ||||||||||| |||| | Sbjct 2794010 CCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 2794069 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || |||||||| || || || |||| | ||||||||| | || Sbjct 2794070 AGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGG 2794129 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || ||||||||| ||||||| || | | | | | ||||| |||| || Sbjct 2794130 ATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTC---TCG 2794186 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || |||| ||| ||||| || ||||||||||| || ||||| || ||||||| Sbjct 2794187 ACTTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATTC 2794238 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || || || |||||| || |||||||||||| |||||| || | || || Sbjct 2794712 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCATCCTCG 2794771 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| ||||| || || || | |||||||| || | ||||| || ||||||||| | Sbjct 2794772 AGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 2794831 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | | ||||||||||| || ||||| | ||||| || || Sbjct 2794832 ATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTG 2794891 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||||||| || || || |||||||| Sbjct 2794892 CCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920 Score = 118 bits (130), Expect = 1e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| || | | ||||| |||| || |||||||| || || || Sbjct 2794274 TCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 2794333 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || |||||||||| || | || ||||||||| |||||| ||| | ||| Sbjct 2794334 ATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGA-CGTT 2794392 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||| || ||||| ||||| | |||||||| || || |||| |||||| || Sbjct 2794393 GTCAATCGTATCTGAAGATTCGACCTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGAC 2794452 Query 35725 AAATATCTGCATTC 35738 || |||||||||| Sbjct 2794453 GAAGATCTGCATTC 2794466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793515476200