Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 seq5 100 2e-16 >seq2 Length=3515922 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || || || || ||||| ||||||| | |||| | || ||| Sbjct 2794712 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTGCGGCCATCCTCG 2794771 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||||||| | ||||| ||||| ||||| || || | || || || || | Sbjct 2794772 AGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 2794831 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | || | ||||| | | ||||| || || || || | ||| Sbjct 2794832 ATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTG 2794891 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| ||| || || ||||| ||||| Sbjct 2794892 CCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| || || || || ||||| ||||||||| || | || | || || Sbjct 2794028 ACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATCCTCA 2794087 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | || || | ||| || || || || | ||||| || || | Sbjct 2794088 AGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGG 2794147 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | ||||||| | || ||||| || || || | ||| Sbjct 2794148 ATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAGCGTAATCGTCTTG 2794207 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||||| ||| || |||||||||||||| Sbjct 2794208 CCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236 >seq5 Length=2445035 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 |||||||||||||||||||||| | || |||||||||| || || |||||| | || Sbjct 1847860 TTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 1847801 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 || ||||| || || || || | ||||| || || ||||||| ||| | | || Sbjct 1847800 AGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 1847741 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239 | ||||||| || ||| || || || || || | |||||||| || || || || ||| Sbjct 1847740 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 1847681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934322316680