Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 248 1e-60 seq1 95.1 2e-14 >seq8 Length=1658097 Score = 248 bits (274), Expect = 1e-60 Identities = 1140/1782 (64%), Gaps = 55/1782 (3%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||||||||| ||| | | ||| | | ||||| |||||||| ||||| ||||| | Sbjct 1351926 TGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATGCCGGTTTTGAGGC 1351867 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 110450 | ||||| || | ||||| || | || ||| ||| || || || || | Sbjct 1351866 CCATCTTCCAGCCGGCGAAGTGCATGGATGTGATTTTGCCCATGGTGGGTTCTTTCAAGT 1351807 Query 110451 AGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGA 110510 || ||| | | ||| ||||| |||||| ||||| | || ||||| | | || Sbjct 1351806 GGATGTTTAGAGATTGGGACTGGTCGATGAAGGCTCCCCGATCGGCTGCCATCTGGAGGA 1351747 Query 110511 CA-TCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATA 110569 | ||| | || | ||||||| || || || || |||||| || | ||||| Sbjct 1351746 TAGTCCGTTGGCTGA-TTTCCCAGACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATG 1351688 Query 110570 TCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGAC 110629 | | || ||||| | ||||| ||| | | || | | |||||| | | ||| Sbjct 1351687 TTGGGAATGTTCTGAACCGAACCACCCTCGGCGATGATACGGTTCTTCATGTTGTCTGAC 1351628 Query 110630 CAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCT 110689 |||||||||| | || || || | ||| |||||| | |||||||| Sbjct 1351627 CAGAGACCAAGGTCGACCAGATCCTTCAAGAGCCATGGGTTGACGACCTGGAACTCACCA 1351568 Query 110690 GCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCC 110749 || ||| | | ||||||||| | || ||||| || |||||||| || || ||| Sbjct 1351567 GCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCGAAGCATTCGTTGTTGCCC 1351508 Query 110750 AAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCC 110809 | ||| || | ||| || || || ||||| || || | | ||| ||| |||| ||| Sbjct 1351507 AGGATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCA 1351448 Query 110810 TTCTCCTTGATG----CGTTCCTTGAGAAC--ATCCCAGTCGTAGTTGAGCTTGGTTTCA 110863 | | ||| | ||| ||| | |||||| || | || ||| | | Sbjct 1351447 TATTTGGCAATGTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCG--GA---TGGGGTGA 1351393 Query 110864 CCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCA 110923 | |||| |||||||| |||| || | ||||| || | || ||||| | || ||| Sbjct 1351392 CATTCC-ACATGTCATACTGGAGAATGCCTTGTGAGACTGGGCTGCCCTCGTATGTCTCA 1351334 Query 110924 TAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTT 110983 || | ||||| ||| || | ||| || || || | ||||| || ||||| Sbjct 1351333 TATGTGCCTTGCTCTTTTGCAAGTTCGCACGATGCAGTGAGAGCCGCGTGGTAGATGGTC 1351274 Query 110984 TCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA- 111042 |||||||| | |||| | || || || ||||| | | || ||| | Sbjct 1351273 TCAAAGATCTGGATGTTCAGTTGTCGAGCCTCTGGAGAGTCAAAGG-GCAGACGCAGAGC 1351215 Query 111043 AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 111102 || || |||| || |||||||| || || | || ||||||| ||||||||||| Sbjct 1351214 AAGGAAGGCATCTGCAAGACCTTGGACCCCAAGGCCGATAGGTCGATGTCGCATATTGCT 1351155 Query 111103 CTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159 ||| | || |||| || || || | || |||| |||| | ||| | ||| Sbjct 1351154 CTTCCTGGC---CTCAGGAACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAAATTGCG 1351098 Query 111160 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 111219 ||| || | || |||| |||||||| | | ||| | || | || | Sbjct 1351097 GGTGACGACCTGAGTGACCTCATGAAGGCGGCCGAAGTCATACTCGCCACGGGGTTGGTC 1351038 Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279 |||| | | ||||| || | || ||||||||||| ||||| |||||| |||| Sbjct 1351037 GACAAAAGTGGGAAGAGCCAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGCGCTGT 1350978 Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 | |||| | || || || || | || || || ||| || ||||| ||||| ||||| Sbjct 1350977 GAACTCGACGATCTCGGTGCAGAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTT 1350918 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 |||||| | ||||| ||||||||||||||||||||||| ||||| ||||| ||||| | Sbjct 1350917 GCTCTTCCTATTGCAGGCATCCTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAGC 1350858 Query 111400 TTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCC-CGTCCCTCC 111457 | ||||| || | ||| | | || | | || | || | | |||| || ||||| Sbjct 1350857 CTCAAGAATCGCATACCACAGCTTCTGGGCCTTG-ACGGT-CTGACGGCCACGGCCCTCT 1350800 Query 111458 GCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 111517 || || | |||||| | | ||||| || || | |||| |||||||| Sbjct 1350799 TTTTCATATCTCTCGTAGAGCTCCTGGAACTCGTCGCCATAGACATCGGCCAGACCTGGA 1350740 Query 111518 GCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAA 111575 |||| | || |||||||||| ||| | || ||| ||| || |||| |||||| | Sbjct 1350739 GCCTCATGAGGGCAGAAAAGAGTCCACT--CCTGGTTCTTCTCGACACGCTCCATGAACA 1350682 Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGG 111634 ||| || |||||| | | || || || | ||| || | ||||| | || ||| Sbjct 1350681 AGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGA-CTTCTTCCTTGCCGTGG 1350623 Query 111635 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694 || || | | ||||| || | || || |||||||| ||||| | |||| ||| Sbjct 1350622 TTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCG 1350563 Query 111695 ATA------GATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747 | | | || ||| | | ||||| || | || ||||| || ||| ||| || Sbjct 1350562 AAAGCACCGGGTCGCTTGTTGCCGCCC----TGGTCGACGTAGCGGGCCGTGTTGTTGAA 1350507 Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTT 111807 || || | ||| ||||| | |||| |||| ||||| || || |||| || Sbjct 1350506 AACACGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGAGCC 1350447 Query 111808 ATTGGCTCTCACATCATGGA-TGTGCAT----CCCAATACCCCCAGCCCACTTTGAGATT 111862 | | || | ||| | || |||| || || || ||||| ||| ||||| Sbjct 1350446 AGTTGCAC-----GAATGCAGTGAGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATC 1350392 Query 111863 TGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATA 111922 ||||| | | || || | ||||| || | ||| || ||||| || |||| Sbjct 1350391 ATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATC 1350332 Query 111923 AGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCG 111982 | ||||||| ||||| ||| ||| |||||| || ||||||||||| || |||| ||| Sbjct 1350331 AAGAAGCAAGAGGACAGCTGAGGTTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGATGCA 1350272 Query 111983 TGAATGAA-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTC 112041 ||| |||| || | |||||||| || ||||||||| | | | ||||| || || Sbjct 1350271 TGAGTGAAGCACTTC-TGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCATC 1350213 Query 112042 CCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||||||||||| | || || ||||| | ||||| |||||| Sbjct 1350212 ACCGTGGATGCCAACAGCCACACGCATAATCATGTGCTGTGG 1350171 >seq1 Length=4142182 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||||||||| || || || ||||||||||| ||| |||||| Sbjct 2622334 GCAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCT 2622275 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777 ||||| |||||| |||| | ||| | || | ||| ||||| |||||||||||||| Sbjct 2622274 GGCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCA-AATGATCCGGAGAAGAAGAT 2622216 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 |||||| || || || |||| || |||| ||||| Sbjct 2622215 ACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAA 2622177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031882244000