Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 188 8e-43 seq1 89.7 6e-13 >seq8 Length=1658097 Score = 188 bits (208), Expect = 8e-43 Identities = 1129/1790 (63%), Gaps = 43/1790 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| ||||| | || || || || || || ||||| | | Sbjct 1350171 CCACAGCACATGATTATGCGTGTGGCTGTTGGCATCCACGGTGATGATATTGAGAAGGCC 1350230 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 104340 | ||||||||| || |||||||| | || |||| ||| ||| |||| || ||||| Sbjct 1350231 ATTGAGACATACAACCTCATGTCCCA-GAAGTGCTTCACTCATGCATCACCCACGCTCTT 1350289 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| || |||||| ||| || ||||| ||||||| | |||| || ||||| || Sbjct 1350290 CAATGCCGGAACACCACAACCTCAGCTGTCCTCTTGCTTCTTGATCGACATGAAGGATGA 1350349 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| | || ||||| | || || | | ||||| ||||| ||| ||||| Sbjct 1350350 TAGCATCGAGGGCATCTACGACACGCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGG 1350409 Query 104461 GGGTATTGG----GATGCACA-TCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 || || || |||| || | || | | || | | || |||| || Sbjct 1350410 TGGCATCGGTCTCAATGCTCACTGCA-----TTCGTGCAACTGGCTCCTATATTGCAGGA 1350464 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || ||||| |||| |||| | ||||| ||| | || || || ||| ||| || ||| Sbjct 1350465 ACCAATGGGACATCAAATGGACTCATTCCCATGTTGCGTGTTTTCAACAACACGGCCCGC 1350524 Query 104576 TATGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCC 104628 || | || | | ||||| | | ||| || || |||| |||| | ||||| Sbjct 1350525 TACG----TCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATCTACTTGGAGCC 1350580 Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688 |||||||| || || | || ||||| | || | ||||| || | || || | Sbjct 1350581 GTGGCACGCTGACGTCTTCGATTTCCTGAATCTGAGAAAGAACCACGGCAAGGAAGAAGT 1350640 Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748 || ||| || || |||| ||| | |||| || || | |||||| || | || || Sbjct 1350641 CCGTGCCCGTGACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGA 1350700 Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT 104808 | ||| | ||| |||| || || || | |||| || ||||| |||||| | Sbjct 1350701 GAAGAACCAGGAGTGGACTCTTTTCTGCCCTCATGAGGCTCCAGGTCTGGCCGATGTCTA 1350760 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868 || || ||||| | | || ||| | || || |||| || || | | ||| Sbjct 1350761 TGGCGACGAGTTCCAGGAGCTCTACGAGAGATATGAAAAAGAGGGCCGTGGCCGTCAGAC 1350820 Query 104869 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 || | || | || | ||||| | || ||||| || |||| || |||||||| || | Sbjct 1350821 CGT-CAAGGCCCAGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACTGAGACTGGGACTC 1350879 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 | |||||||| ||||| || ||||| || ||||| || || ||||| ||||| | Sbjct 1350880 CCTACATGCTCTACAAGGATGCCTGCAATAGGAAGAGCAACCAGAAGAACTTGGGCACCA 1350939 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 | || || |||||||| || || ||| | || || |||| |||||| |||| Sbjct 1350940 TTCGAAGCTCAAATCTCTGCACCGAGATCGTCGAGTTCACAGCGCCTGATGAGGTTGCTG 1350999 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTT 105106 | || || | || || | ||||| |||| | ||| || ||| | | | | | Sbjct 1351000 TCTGCAATTTGGCTTCCCTGGCTCTTCCCACTTTTGTCGA-CCAACCCCGTGGCGAGTAT 1351058 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 || | | || || || || || | |||||| || | |||| | | || Sbjct 1351059 GACTTCGGCCGCCTTCATGAGGTCACTCAGGTCGTCACCCGCAATTTGAACAAAATCATC 1351118 Query 105167 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 || | || | ||||| || |||| || | || |||||| |||| || || Sbjct 1351119 GACATCAACTACTACCCGGTTCCTGAG---GCCAGGAAGAGCAATATGCGACATCGACCT 1351175 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGA 105282 || || || || || || ||||| || |||| ||| || || || || | | ||||| Sbjct 1351176 ATCGGCCTTGGGGTCCAAGGTCTTGCAGATGCCTTCCTTGCTCTG-CGTCTGCCCTTTGA 1351234 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 || || || || | || | || ||||||||||| || ||||| ||||| Sbjct 1351235 CTCTCCAGAGGCTCGACAACTGAACATCCAGATCTTTGAGACCATCTACCACGCGGCTCT 1351294 Query 105343 TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402 || | || | ||| | | | || ||||||| || | ||||| || Sbjct 1351295 CACTGCATCGTGCGAACTTGCAAAAGAGCAAGGCACATATGAGACATACGAGGGCAGCCC 1351354 Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACG 105461 || |||||||| | || || | ||| |||| |||| || | ||| | | | | Sbjct 1351355 AGTCTCACAAGGCATTCTCCAGTATGACATGT-GGAATGTCACCCCATCCGACCTGTGGG 1351413 Query 105462 ACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGG 105521 | ||||| | | || | ||| | | ||| |||| ||| ||||||| | | Sbjct 1351414 ATTGGGACTCCTTGAAAGCCGACATTGCCAAATATGGTGTTCGCAACTCTCTCCTCGTTG 1351473 Query 105522 CTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 105581 |||| ||||| || || || ||| | || ||| |||| || || |||||||| || || | Sbjct 1351474 CTCCTATGCCTACCGCGTCAACCTCCCAGATCCTGGGCAACAACGAATGCTTCGAGCCAT 1351533 Query 105582 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGC 105641 | || | |||||||| | | ||| || || ||||| | | |||||| | Sbjct 1351534 ATACTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTCCAGGTCGTCAAC--CC 1351591 Query 105642 AT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 105699 || ||| || | || || || ||||||||||||| | | |||||| | | || Sbjct 1351592 ATGGCTCTTGAAGGATCTGGTCGACCTTGGTCTCTGGTCAGACAACATGAAGAACCGTAT 1351651 Query 105700 GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTT 105759 | | ||||||||| |||| || ||| | || || || || ||| | Sbjct 1351652 CATCGCCGAGGGTGGTTCGGTTCAGAACATTCCCAACATCCCTGCCGACATCAAGGCACT 1351711 Query 105760 GTACCGCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATCGTG 105818 |||| || || ||||||||| || | ||| | || | | ||||| || ||||| | Sbjct 1351712 GTACAAGACTGTCTGGGAAATC-AGCCAACGGACTATCCTCCAGATGGCAGCCGATCGGG 1351770 Query 105819 GTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCA 105878 | |||||| || || ||| | | || || | || || || || ||| || Sbjct 1351771 GAGCCTTCATCGACCAGTCCCAATCTCTAAACATCCACTTGAAAGAACCCACCATGGGCA 1351830 Query 105879 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 105938 | || | || |||||| | | | ||||||| ||| |||||||| || ||||| |||| Sbjct 1351831 AAATCACATCCATGCACTTCGCCGGCTGGAAGATGGGCCTCAAAACCGGCATGTACTACC 1351890 Query 105939 TCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGAA 105988 |||| | | ||| | | || |||||||||| | | || | |||| Sbjct 1351891 TCCGCACCATGGCCGCTACACAACCCATTCAGTTCACTGTCGATCAAGAA 1351940 >seq1 Length=4142182 Score = 89.7 bits (98), Expect = 6e-13 Identities = 179/259 (69%), Gaps = 10/259 (4%) Strand=Plus/Plus Query 94702 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGAT 94761 ||||||| | || || || || ||| | || | || || || | ||||| || || Sbjct 2622081 GAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATACGGAAGAAGGCCGAC 2622140 Query 94762 TGGGCTATGAAGTGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 94818 |||||| | | ||| | ||||| |||| || | ||| | ||||| | || Sbjct 2622141 TGGGCTCTTAGATGGATCTCTGATAAGGAGTCCACTTTC---GCTCAACGACTGGTTGCT 2622197 Query 94819 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAA 94877 || || || ||||||||||||||||| || || || ||| | || | |||||||| Sbjct 2622198 TTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATT-TGCTTCAATCTTCTGGCTCAA 2622256 Query 94878 GAAGCGA-GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 | ||| | ||||| |||||||||||| ||| || || || || ||||||||||| |||| Sbjct 2622257 G-AGCAAGGGTCTGATGCCAGGTCTCACCTTTTCAAATGAACTCATCTCTCGTGATGAGG 2622315 Query 94937 GACTCCACCAAGAGTTTGC 94955 | | ||| || ||||| Sbjct 2622316 GTATGCACACCGATTTTGC 2622334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260690638600