Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4 302 1e-76 seq2 147 7e-30 seq13 93.3 1e-13 seq5 84.2 7e-11 >seq4 Length=3044656 Score = 302 bits (334), Expect = 1e-76 Identities = 939/1447 (65%), Gaps = 16/1447 (1%) Strand=Plus/Minus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 ||||| |||||| |||||||||| || || || || | | | | | |||| || | Sbjct 1485857 ATAGGTATCGATCTAGGTACTACCTACTCATGCGTAGGCATCTTCCGAGATGACCGCATT 1485798 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || ||||| || || ||||| ||| |||| || || || | || || |||||||| Sbjct 1485797 GAGATCATTGCCAACGACCAAGGCAACCGAACCACCCCCTCCTTTGTCGCCTTTACCGAC 1485738 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 ||||||||| | ||||||||| | || || ||||||| ||| ||||| | ||||| Sbjct 1485737 ACTGAGCGTCTCATTGGTGATGCCGCCAAGAATCAAGTCGCTATGAATCCTCAGAATACC 1485678 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA---CAAATCTACACAATCT 349438 || || || || |||||||| || || | | || |||| | || | ||| | Sbjct 1485677 GTCTTCGACGCGAAGCGACTGATCGGCCGGAAATTCGCTGATCCCGAAGTT---CAAGCC 1485621 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 ||| | || || ||||| || | || || | ||| || | || ||| | || | Sbjct 1485620 GATATGAAGCACTTTCCCTTCAAGGTCATTG-ACAAG--GGAGGCAAGCCAGTCATCCAA 1485564 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 || || | ||||| || | |||||||| ||||||||| || || |||||||| | Sbjct 1485563 GTCGAGTTCAAAGGCGAGGAGAAACAATTCACACCCGAAGAGATCTCGTCAATGGTCCTC 1485504 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 || |||| || | ||| || |||| | |||| || || | | || || | Sbjct 1485503 ACAAAGATGAGAGAGACTGCCGAGTCATACCTCGGTGGCACCGTCAACAACGCCGTCGTC 1485444 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || || || ||||| || || | ||||| || || ||||| || || || Sbjct 1485443 ACAGTCCCCGCGTATTTCAACGACTCTCAGCGCCAAGCCACCAAAGACGCAGGTCTGATC 1485384 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | ||||| || | || || || || || |||||||| || ||||| || || Sbjct 1485383 GCAGGTCTCAATGTCCTCCGTATCATCAACGAGCCGACTGCTGCCGCCATTGCCTACGGT 1485324 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || || || | || || || || | || ||||| ||| | ||||||||||| Sbjct 1485323 CTCGACAAGAAGACCGAGGGTGAGCGCAACGTCCTCATTTTCGATCTCGGTGGTGGTACC 1485264 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || ||||| || || || || | || || || || || ||||| || | ||||||||| Sbjct 1485263 TTCGATGTGTCGCTCCTGACCATCGAGGAAGGCATCTTCGAAGTCAAGTCTACTGCTGGT 1485204 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || || || | ||||| || || || || || || | || || || || | ||| Sbjct 1485203 GACACCCACTTGGGTGGTGAGGACTTCGACAACCGCTTGGTCAACCACTTCGTACAGGAA 1485144 Query 349919 TTTAAGCGTCAAGCTAAAATTGATATTGGAGAT--AATCCTAGAGCAATGCGTCGCCTAA 349976 || || || || ||| | | | | ||| | || | | || | || || || Sbjct 1485143 TTCAAACGCAAACATAAGAAGG--ACTTGAGCTCCAACGCCCGTGCTCTTCGACGTCTCC 1485086 Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036 | || || || || || || ||||| | || || ||| | |||| || || ||||||| Sbjct 1485085 GCACCGCTTGCGAGCGGGCCAAGCGCACTTTGTCGTCTTCCGCCCAGACGTCCATTGAAA 1485026 Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096 |||| ||||| ||| || | || |||| | || || || |||||||| || |||| Sbjct 1485025 TTGACTCTCTCTATGAGGGTATCGACTTCTACACCTCCATCACTCGTGCTCGTTTCGAAG 1484966 Query 350097 AATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATG 350156 | |||| || || || | | |||||||| ||||| || || | | || | Sbjct 1484965 AGCTATGCCAAGACCTCTTCCGTTCTACAATGGAGCCTGTCGAGCGTGTGCTGAGGGACG 1484906 Query 350157 CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTC 350216 | || || ||| | | || | ||| | || || || ||||| || || || |||| Sbjct 1484905 CCAAGATCGACAAGTCTTCGGTTCACGAAATCGTCTTGGTCGGTGGATCCACGCGCATTC 1484846 Query 350217 CAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTA 350276 | | || || | | || || || || |||||||| ||||| | ||| || | Sbjct 1484845 CTCGCATCCAGAAGCTTGTTTCCGACTTCTTCAATGGCAAGGAACCCAACAAATCGATCA 1484786 Query 350277 ATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATA 350336 | || ||||| || || || || ||||| || || ||||| | ||| | ||||| ||| Sbjct 1484785 ACCCCGATGAGGCCGTCGCCTACGGTGCCGCAGTCCAGGCTGCCATTCTGTCTGGCGATA 1484726 Query 350337 AGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGAT 350393 || || | | || | | | || ||||| | || || || || || Sbjct 1484725 CCTCGTCCAAGTCGACCAACGAAATCCTCTTGCTCGATGTTGCGCCGCTGTCTCTCGGTA 1484666 Query 350394 TAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAA 350453 | || ||| |||||| || |||||| ||| || | || | || | || || | Sbjct 1484665 TCGAGACTGCTGGTGGTGTCATGACTCCTCTCATCAAGCGGAACACCACCATCCCCACGA 1484606 Query 350454 AAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTAT 350513 | |||||| | || || ||||| ||| | || || || || | || || ||||| | Sbjct 1484605 AGAAGTCCGAGACCTTCTCTACCTTTTCCGACAACCAACCGGGTGTGCTCATCCAAGTCT 1484546 Query 350514 TTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTG 350573 |||||||| |||||||| || || || || ||| || || | || || | Sbjct 1484545 ACGAAGGTGAGCGTGCTCGTACCAAGGACAACAATCTGCTCGGCAAGTTCGAGCTTTCCG 1484486 Query 350574 AAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAA 350633 ||||| || ||| | || |||||||||||||| ||| | |||||| ||||| | | Sbjct 1484485 GCATTCCGCCTGCTCCTCGTGGTGTTCCTCAGATTGAGGTCACATTCGATCTTGATGCCA 1484426 Query 350634 ATGGTAT 350640 ||||||| Sbjct 1484425 ATGGTAT 1484419 >seq2 Length=3515922 Score = 147 bits (162), Expect = 7e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || ||||| ||||| || ||||| || || || || || Sbjct 2794462 CATTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTC 2794521 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||||||||| ||||| |||||||| |||||||||||||| || Sbjct 2794522 GGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGG 2794581 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || || ||||| || || ||||| || ||| || || || || || | ||| | | Sbjct 2794582 GGGGATGCCTTCCTTGTCTTGAATCTT-GCTCTTGACGTTGTCGATGGTATCGCTCGACT 2794640 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 |||| ||||| |||| ||||| || || || || || |||||||| |||||| Sbjct 2794641 CAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693 Score = 104 bits (114), Expect = 7e-17 Identities = 166/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | || || | || | || ||||| || || || || | Sbjct 2794686 TTTGCATTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGT 2794745 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || || || ||||| || || ||||| || || ||||| || || ||||||| Sbjct 2794746 AATCGCTCAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGAT 2794805 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 |||||||||| ||||| || ||||| || || ||| || ||||| || || | || Sbjct 2794806 CAGGAGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCGCTC 2794864 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || || | ||||| ||||| | || || || || |||||||| Sbjct 2794865 GACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920 >seq13 Length=2370553 Score = 93.3 bits (102), Expect = 1e-13 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 378220 AGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACA 378279 ||||| || |||||| ||||||| ||| || || || ||||| || | ||| | Sbjct 284388 AGTCGACGTTGAATATATCCAGTTTCGGCAGTCTTGACAGCTGTATCGATAAGACCCTCG 284329 Query 378280 CGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTC 378339 || ||| |||| || |||||||| || || || || || || |||| || | || || Sbjct 284328 CGCCCAGCCATGGCGTGGAAGAAGAACTCCGTCGGGGTCAGACCACGAAGGTAGGAGTTC 284269 Query 378340 TCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGA 378399 |||| || ||||| | | | |||| ||| | || ||| | ||||| | | ||| Sbjct 284268 TCAACGAAACCTCTCGAGGGCGCAGAATAATCGTCCTTCGTAAAGTGAGGGAGACTGCGA 284209 Query 378400 TTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAA 378448 | || || ||| | ||||| ||||| || || ||| ||||||||||| Sbjct 284208 TACTTGAAGCCAAAGGGAATGCGTTTCCCTTCCACAGCCTGTTGACCAA 284160 >seq5 Length=2445035 Score = 84.2 bits (92), Expect = 7e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 ||||||||||| || || || || || || ||||| ||||| || || || ||||| Sbjct 1847860 TTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 1847801 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 || || ||||| ||||| || || || || || || || || || | ||| ||||| || Sbjct 1847800 AGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 1847741 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || | || || | ||| || || || || | ||||| || || || || || || || Sbjct 1847740 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1847682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254108787045