Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq4 302 1e-76
seq2 147 7e-30
seq13 93.3 1e-13
seq5 84.2 7e-11
>seq4
Length=3044656
Score = 302 bits (334), Expect = 1e-76
Identities = 939/1447 (65%), Gaps = 16/1447 (1%)
Strand=Plus/Minus
Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261
||||| |||||| |||||||||| || || || || | | | | | |||| || |
Sbjct 1485857 ATAGGTATCGATCTAGGTACTACCTACTCATGCGTAGGCATCTTCCGAGATGACCGCATT 1485798
Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321
|| || ||||| || || ||||| ||| |||| || || || | || || ||||||||
Sbjct 1485797 GAGATCATTGCCAACGACCAAGGCAACCGAACCACCCCCTCCTTTGTCGCCTTTACCGAC 1485738
Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381
||||||||| | ||||||||| | || || ||||||| ||| ||||| | |||||
Sbjct 1485737 ACTGAGCGTCTCATTGGTGATGCCGCCAAGAATCAAGTCGCTATGAATCCTCAGAATACC 1485678
Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA---CAAATCTACACAATCT 349438
|| || || || |||||||| || || | | || |||| | || | ||| |
Sbjct 1485677 GTCTTCGACGCGAAGCGACTGATCGGCCGGAAATTCGCTGATCCCGAAGTT---CAAGCC 1485621
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498
||| | || || ||||| || | || || | ||| || | || ||| | || |
Sbjct 1485620 GATATGAAGCACTTTCCCTTCAAGGTCATTG-ACAAG--GGAGGCAAGCCAGTCATCCAA 1485564
Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558
|| || | ||||| || | |||||||| ||||||||| || || |||||||| |
Sbjct 1485563 GTCGAGTTCAAAGGCGAGGAGAAACAATTCACACCCGAAGAGATCTCGTCAATGGTCCTC 1485504
Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618
|| |||| || | ||| || |||| | |||| || || | | || || |
Sbjct 1485503 ACAAAGATGAGAGAGACTGCCGAGTCATACCTCGGTGGCACCGTCAACAACGCCGTCGTC 1485444
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
|| || || || ||||| || || | ||||| || || ||||| || || ||
Sbjct 1485443 ACAGTCCCCGCGTATTTCAACGACTCTCAGCGCCAAGCCACCAAAGACGCAGGTCTGATC 1485384
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
|| || | ||||| || | || || || || || |||||||| || ||||| || ||
Sbjct 1485383 GCAGGTCTCAATGTCCTCCGTATCATCAACGAGCCGACTGCTGCCGCCATTGCCTACGGT 1485324
Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798
|| || || | || || || || | || ||||| ||| | |||||||||||
Sbjct 1485323 CTCGACAAGAAGACCGAGGGTGAGCGCAACGTCCTCATTTTCGATCTCGGTGGTGGTACC 1485264
Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858
|| ||||| || || || || | || || || || || ||||| || | |||||||||
Sbjct 1485263 TTCGATGTGTCGCTCCTGACCATCGAGGAAGGCATCTTCGAAGTCAAGTCTACTGCTGGT 1485204
Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918
|| || || | ||||| || || || || || || | || || || || | |||
Sbjct 1485203 GACACCCACTTGGGTGGTGAGGACTTCGACAACCGCTTGGTCAACCACTTCGTACAGGAA 1485144
Query 349919 TTTAAGCGTCAAGCTAAAATTGATATTGGAGAT--AATCCTAGAGCAATGCGTCGCCTAA 349976
|| || || || ||| | | | | ||| | || | | || | || || ||
Sbjct 1485143 TTCAAACGCAAACATAAGAAGG--ACTTGAGCTCCAACGCCCGTGCTCTTCGACGTCTCC 1485086
Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036
| || || || || || || ||||| | || || ||| | |||| || || |||||||
Sbjct 1485085 GCACCGCTTGCGAGCGGGCCAAGCGCACTTTGTCGTCTTCCGCCCAGACGTCCATTGAAA 1485026
Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096
|||| ||||| ||| || | || |||| | || || || |||||||| || ||||
Sbjct 1485025 TTGACTCTCTCTATGAGGGTATCGACTTCTACACCTCCATCACTCGTGCTCGTTTCGAAG 1484966
Query 350097 AATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATG 350156
| |||| || || || | | |||||||| ||||| || || | | || |
Sbjct 1484965 AGCTATGCCAAGACCTCTTCCGTTCTACAATGGAGCCTGTCGAGCGTGTGCTGAGGGACG 1484906
Query 350157 CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTC 350216
| || || ||| | | || | ||| | || || || ||||| || || || ||||
Sbjct 1484905 CCAAGATCGACAAGTCTTCGGTTCACGAAATCGTCTTGGTCGGTGGATCCACGCGCATTC 1484846
Query 350217 CAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTA 350276
| | || || | | || || || || |||||||| ||||| | ||| || |
Sbjct 1484845 CTCGCATCCAGAAGCTTGTTTCCGACTTCTTCAATGGCAAGGAACCCAACAAATCGATCA 1484786
Query 350277 ATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATA 350336
| || ||||| || || || || ||||| || || ||||| | ||| | ||||| |||
Sbjct 1484785 ACCCCGATGAGGCCGTCGCCTACGGTGCCGCAGTCCAGGCTGCCATTCTGTCTGGCGATA 1484726
Query 350337 AGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGAT 350393
|| || | | || | | | || ||||| | || || || || ||
Sbjct 1484725 CCTCGTCCAAGTCGACCAACGAAATCCTCTTGCTCGATGTTGCGCCGCTGTCTCTCGGTA 1484666
Query 350394 TAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAA 350453
| || ||| |||||| || |||||| ||| || | || | || | || || |
Sbjct 1484665 TCGAGACTGCTGGTGGTGTCATGACTCCTCTCATCAAGCGGAACACCACCATCCCCACGA 1484606
Query 350454 AAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTAT 350513
| |||||| | || || ||||| ||| | || || || || | || || ||||| |
Sbjct 1484605 AGAAGTCCGAGACCTTCTCTACCTTTTCCGACAACCAACCGGGTGTGCTCATCCAAGTCT 1484546
Query 350514 TTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTG 350573
|||||||| |||||||| || || || || ||| || || | || || |
Sbjct 1484545 ACGAAGGTGAGCGTGCTCGTACCAAGGACAACAATCTGCTCGGCAAGTTCGAGCTTTCCG 1484486
Query 350574 AAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAA 350633
||||| || ||| | || |||||||||||||| ||| | |||||| ||||| | |
Sbjct 1484485 GCATTCCGCCTGCTCCTCGTGGTGTTCCTCAGATTGAGGTCACATTCGATCTTGATGCCA 1484426
Query 350634 ATGGTAT 350640
|||||||
Sbjct 1484425 ATGGTAT 1484419
>seq2
Length=3515922
Score = 147 bits (162), Expect = 7e-30
Identities = 174/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | | || || ||||| ||||| || ||||| || || || || ||
Sbjct 2794462 CATTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTC 2794521
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || ||||||||||| ||||| |||||||| |||||||||||||| ||
Sbjct 2794522 GGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGG 2794581
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|| || ||||| || || ||||| || ||| || || || || || | ||| | |
Sbjct 2794582 GGGGATGCCTTCCTTGTCTTGAATCTT-GCTCTTGACGTTGTCGATGGTATCGCTCGACT 2794640
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|||| ||||| |||| ||||| || || || || || |||||||| ||||||
Sbjct 2794641 CAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
Score = 104 bits (114), Expect = 7e-17
Identities = 166/236 (70%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| ||||| || | | || || | || | || ||||| || || || || |
Sbjct 2794686 TTTGCATTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGT 2794745
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| || || || ||||| || || ||||| || || ||||| || || |||||||
Sbjct 2794746 AATCGCTCAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGAT 2794805
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
|||||||||| ||||| || ||||| || || ||| || ||||| || || | ||
Sbjct 2794806 CAGGAGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCGCTC 2794864
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| ||||| || || || | ||||| ||||| | || || || || ||||||||
Sbjct 2794865 GACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
>seq13
Length=2370553
Score = 93.3 bits (102), Expect = 1e-13
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 378220 AGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACA 378279
||||| || |||||| ||||||| ||| || || || ||||| || | ||| |
Sbjct 284388 AGTCGACGTTGAATATATCCAGTTTCGGCAGTCTTGACAGCTGTATCGATAAGACCCTCG 284329
Query 378280 CGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTC 378339
|| ||| |||| || |||||||| || || || || || || |||| || | || ||
Sbjct 284328 CGCCCAGCCATGGCGTGGAAGAAGAACTCCGTCGGGGTCAGACCACGAAGGTAGGAGTTC 284269
Query 378340 TCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGA 378399
|||| || ||||| | | | |||| ||| | || ||| | ||||| | | |||
Sbjct 284268 TCAACGAAACCTCTCGAGGGCGCAGAATAATCGTCCTTCGTAAAGTGAGGGAGACTGCGA 284209
Query 378400 TTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAA 378448
| || || ||| | ||||| ||||| || || ||| |||||||||||
Sbjct 284208 TACTTGAAGCCAAAGGGAATGCGTTTCCCTTCCACAGCCTGTTGACCAA 284160
>seq5
Length=2445035
Score = 84.2 bits (92), Expect = 7e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
||||||||||| || || || || || || ||||| ||||| || || || |||||
Sbjct 1847860 TTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 1847801
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
|| || ||||| ||||| || || || || || || || || || | ||| ||||| ||
Sbjct 1847800 AGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 1847741
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728
|| | || || | ||| || || || || | ||||| || || || || || || ||
Sbjct 1847740 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1847682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515254108787045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |