Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq8 226 3e-54
seq2 120 3e-22
>seq8
Length=1658097
Score = 226 bits (250), Expect = 3e-54
Identities = 474/704 (67%), Gaps = 2/704 (0%)
Strand=Plus/Plus
Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301
|||||| ||| || | ||| ||| |||| ||| || || || | || || || |||||
Sbjct 1350233 TGAGACATACAACCTCATGTCCCAGAAGTGCTTCACTCATGCATCACCCACGCTCTTCAA 1350292
Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361
|| || || || |||||| |||| |||||| || | | |||||||||||
Sbjct 1350293 TGCCGGAACACCACAACCTCAGCTGTCCTCTTGCTTCTTGATCGACATGAAGGATGATAG 1350352
Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421
||||| ||||||||||| ||||||||| |||||| ||||||||| | |||||
Sbjct 1350353 CATCGAGGGCATCTACGACACGCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGTGG 1350412
Query 53422 TATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480
|||||| || | ||||| | | ||||| | ||| | || || || || |
Sbjct 1350413 CATCGGTCTCAA-TGCTCACTGCATTCGTGCAACTGGCTCCTATATTGCAGGAACCAATG 1350471
Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540
| | ||||| || | || ||| | || || ||||||||||||||||| ||||||
Sbjct 1350472 GGACATCAAATGGACTCATTCCCATGTTGCGTGTTTTCAACAACACGGCCCGCTACGTCG 1350531
Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600
||||||| || ||||| || | |||||||||||| | |||||||||||||| |
Sbjct 1350532 ACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATCTACTTGGAGCCGTGGCACGCTG 1350591
Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTG 53660
|| | | || || || | ||| | ||| || || | ||||| | || |||||
Sbjct 1350592 ACGTCTTCGATTTCCTGAATCTGAGAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGTG 1350651
Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720
||||||| ||| |||||| || ||| | |||||| | || |||||| || |||
Sbjct 1350652 ACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAGAACCAGG 1350711
Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780
||||| || | ||||| | ||| || || || | |||||| || || ||||
Sbjct 1350712 AGTGGACTCTTTTCTGCCCTCATGAGGCTCCAGGTCTGGCCGATGTCTATGGCGACGAGT 1350771
Query 53781 TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGC 53840
| | ||| | || || || | | ||||||| | ||| |||||||| |
Sbjct 1350772 TCCAGGAGCTCTACGAGAGATATGAAAAAGAGGGCCGTGGCCGTCAGACCGTCAAGGCCC 1350831
Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900
|| | ||| |||| || || || ||| ||||| || || || |||||| ||
Sbjct 1350832 AGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACTGAGACTGGGACTCCCTACATGCTCT 1350891
Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
|||||||| | ||| ||||||||||||||||||| | |||
Sbjct 1350892 ACAAGGATGCCTGCAATAGGAAGAGCAACCAGAAGAACTTGGGC 1350935
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| || || ||||| |||||||| || | |||||| ||||||||
Sbjct 1351455 CGCAACTCTCTCCTCGTTGCTCCTATGCCTACCGCGTCAACCTCCCAGATCCTGGGCAAC 1351514
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
||||| |||||||| || || ||||||||||| || || ||| || ||||||
Sbjct 1351515 AACGAATGCTTCGAGCCATATACTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAG 1351574
Query 55604 TT 55605
||
Sbjct 1351575 TT 1351576
Score = 86.0 bits (94), Expect = 7e-12
Identities = 104/139 (75%), Gaps = 2/139 (1%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCC 55845
|| ||||| || || | ||||||||||||||| ||||| |||||| | || |||| ||
Sbjct 1351761 GCCGATCGGGGAGCCTTCATCGACCAGTCCCAATCTCTAAACATCCACTTGAAAGAACCC 1351820
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
|| ||| ||| | | || |||||||| ||| ||||||| ||| ||||| || ||
Sbjct 1351821 ACCA-TGGGCAAAATCACATCCATGCACTTCGCCGGCTGGAAGATGGGCCTCAAAACCGG 1351879
Query 55906 TATGTACTATCTGCGGACC 55924
|||||||| || || |||
Sbjct 1351880 CATGTACTACCTCCGCACC 1351898
>seq2
Length=3515922
Score = 120 bits (132), Expect = 3e-22
Identities = 298/450 (66%), Gaps = 2/450 (0%)
Strand=Plus/Plus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|| |||||||| || || ||||| || | |||||||| || ||||| || | ||||
Sbjct 522697 CCGGTTCCGATGCCGTCGGCACCGTTGACAAGAATCATGGGGACGACTGGCGCATAGACT 522756
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCA-CTCGG 117270
|| || || | | ||||||| || |||| |||| | | | || || ||
Sbjct 522757 TCTGGTTCGATTTTTTTGTCGTCGTCGGTATTGTACGTGAGAAGAGGCTCATCGGCTTGG 522816
Query 117271 ATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGC 117330
| ||| | ||| ||| | |||| |||||| || || || ||||||| ||||||||
Sbjct 522817 -TGGAAGAGCTTCCTGGCAAAAGGTGATAGGCGGGTAAAGATATAACGAGCGCTTGCAGA 522875
Query 117331 ATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390
|| | || || || ||||| ||||| || ||||| | ||||| | |||
Sbjct 522876 GTCACTACCTCCCTGGTTTCGAGTACCAAATTGGCCTGATGGCTCAAGCAGGTTGATGTT 522935
Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450
||| | || || || ||||||||||| ||||| || |||||| ||||| ||
Sbjct 522936 GTTCGATCCGACGAAAGTTTGAGCCAAGCCAACAATTGTCTGTTGGAGAGAAGCCTCGCC 522995
Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGA 117510
|||||||| || ||| | |||| |||| ||||| | ||| || ||||| ||
Sbjct 522996 GTGGTGATAAGCGGTCATTCCACCCACCAAGCCTGCCAGTTCAGCGACTTTCATATCCTT 523055
Query 117511 CGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570
| ||| || |||| ||| ||||| || || || ||||| | ||||| | || ||
Sbjct 523056 CCGCAGATTTCGTTTGAAGCATGCATACATGACTTTTCGCTGCCCGGGCTTTAAGCCGTC 523115
Query 117571 CGCCACGTGAGGGATCGAACGCTTGATGTC 117600
| ||| ||| || ||||| || ||||
Sbjct 523116 GACGACGGAAGGAATGGAACGGATGTTGTC 523145
Score = 84.2 bits (92), Expect = 2e-11
Identities = 169/251 (67%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 152074 CGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTC 152133
|| || ||||| || || || ||||| || ||||||| |||||| | || |||||| |
Sbjct 522895 CGAGTACCAAATTGGCCTGATGGCTCAAGCAGGTTGATGTTGTTCGATCCGACGAAAGTT 522954
Query 152134 TGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGC 152193
|||||||| ||||| || || ||| || || ||||||||||| || |||
Sbjct 522955 TGAGCCAAGCCAACAATTGTCTGTTGGAGAGAAGCCTCGCCGTGGTGATAAGCGGTCATT 523014
Query 152194 TCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGA 152253
| | | | || |||| | || || ||||| ||| || ||| || ||||
Sbjct 523015 CCACCCACCAAGCCTGCCAGTTCAGCGACTTTCATATCCTTCCGCAGATTTCGTTTGAAG 523074
Query 152254 CAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAA 152313
|| || || || || || ||||| || || || ||||| || ||| |||||| |||
Sbjct 523075 CATGCATACATGACTTTTCGCTGCCCGGGCTTTAAGCCGTCGACGACGGAAGGAATGGAA 523134
Query 152314 CGCTTGATGTC 152324
|| || ||||
Sbjct 523135 CGGATGTTGTC 523145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215897397000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |