Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq8 235 6e-57 seq2 179 4e-40 seq5 102 9e-17 >seq8 Length=1658097 Score = 235 bits (260), Expect = 6e-57 Identities = 1107/1741 (64%), Gaps = 43/1741 (2%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || ||||||||||| || ||||||||| ||||||||||| | |||||| || Sbjct 1351897 GTGCGGAGGTAGTACATGCCGGTTTTGAGGCCCATCTTCCAGCCGGCGAAGTGCATGGAT 1351838 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| || | | ||||| | | || | |||||| ||||| || ||||| |||| Sbjct 1351837 GTGATTTTGCCCATGGTGGGTTCTTTCAAGTGGATGTTTAGAGATTGGGACTGGTCGATG 1351778 Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217 || || || ||||| || ||||| | | || | | ||| |||||||| || || Sbjct 1351777 AAGGCTCCCCGATCGGCTGCCATCTGGAGGATAGTCCGTTGGCTGATTTCCCAGACAGTC 1351718 Query 80218 CGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACTGCCACCG 80271 |||| |||| || | || | || |||| || || || || ||||| Sbjct 1351717 TTGTACAGTGCCTT--GATG-TCGGCAGGGATGTTGGGAATGTTCTGAACCGAACCACCC 1351661 Query 80272 TCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTC 80331 || | || | || |||| | | ||||| |||||| | | |||||| ||| Sbjct 1351660 TCGGCGATGATACGGTTCTTCATGTTGTCTGACCAGAGACCAAGGTCGACCAGATCCTTC 1351601 Query 80332 ACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTT 80391 | || ||| | | ||||| || || ||| ||||| || | ||| Sbjct 1351600 AAGAGCCATGGGTTGACGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTG 1351541 Query 80392 GTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGC 80451 | ||| || ||||| || |||||||| || |||||||| | || ||| || ||| Sbjct 1351540 GAAGTATATGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGGGAGGTTGACGCGGTAGGC 1351481 Query 80452 ATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCT 80511 || || | || | || || || || | || | || || || | ||| Sbjct 1351480 ATAGGAGCAACGAGGAGAGAGTTGCGAACACCATATTTGGCAATGTCGGCTTTCAAGGAG 1351421 Query 80512 GACCAAAAAT-CAACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCC 80568 |||| || | | | ||||| ||||||||| | ||| | ||||| | Sbjct 1351420 TCCCAATCCCACAGGTCGGATGGGGTGACATTCCACATGTCATACTGGAGAATGCCTTGT 1351361 Query 80569 GACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGAC 80628 || | || ||| || | ||||| || | ||| | | || || || || ||||| Sbjct 1351360 GAGACTGGGCTGCCCTCGTATGTCTCATATGTGCCTTGCTCTTTTGCAAGTTCGCACGAT 1351301 Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688 | | || |||||||| || ||| |||||||| |||||| || |||| | Sbjct 1351300 GCAGTGAGAGCCGCGTGGTAGATGGTCTCAAAGATCTGGATGTTCAGTTGTCGAGCCTCT 1351241 Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748 || ||| || | || | || | ||| | || || || || || || || | | Sbjct 1351240 GGAGAGTCAAAGGGCAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGGACCCCAAGG 1351181 Query 80749 GCGATCGGGCGGTGGCGCTTGTTCGATCGCTC-GGCCTCCGGAATTGGGTAAAAGTTATT 80807 |||| || || || ||| | || | || | |||||| |||| ||||| |||| | Sbjct 1351180 CCGATAGGTCGATGTCGCATATT-GCTCTTCCTGGCCTCAGGAACCGGGTAGTAGTTGAT 1351122 Query 80808 ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAA 80867 ||||||| ||||| ||||| || || ||| | || || |||||||| || Sbjct 1351121 GTCGATGATTTTGTTCAAATTGCGGGTGACGACCTGAGTGACCTCATGAAGGCGGCCGAA 1351062 Query 80868 GTCGAATTGGTTCCCCT-------TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTG 80919 ||| | | | || | || ||||| | ||||| |||||| |||| |||| Sbjct 1351061 GTCATACTCG--CCACGGGGTTGGTCGACAAAAGTGGGAAGAGCCAGGGAAGCCAAATTG 1351004 Query 80920 CACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGAC 80979 || || || ||||| |||| |||| ||||||||||| || ||||| | ||| || | Sbjct 1351003 CAGACAGCAACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAGAGATTTGAG--C 1350946 Query 80980 TT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACA 81037 || ||| || |||| ||| |||||||| ||| ||||| || ||||||||| || Sbjct 1350945 TTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCATCCTTGTAGAGCA 1350886 Query 81038 TGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCT 81097 |||| || || || ||||| ||| | || || || || | ||| | || | |||| Sbjct 1350885 TGTAGGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCACAGCTTCTGGGCCT 1350826 Query 81098 TGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTG 81156 |||| || ||| ||| || |||| | |||| |||| | | ||||| | Sbjct 1350825 TGACGGTCTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGCTCC-TGGAACTCG 1350767 Query 81157 GCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTG 81216 | || | | || | || |||| ||| | |||||| | || ||| || | Sbjct 1350766 TCGCCATAGACATCGGCCAGACCTGGAGCCTCATGAGGGCAGAAAAGAGTCCACTCCTGG 1350707 Query 81217 TCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGG 81276 | ||||| ||| || |||||| ||||||| |||| | || ||||||||| ||| Sbjct 1350706 TTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGG 1350647 Query 81277 CAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCA 81336 || | || || | || ||||| | || | || || || | || ||| || Sbjct 1350646 GCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCG 1350587 Query 81337 TGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GCCACCCTGGTTG 81390 ||||| ||||||| || | ||||| | || | | || ||| ||||||| | Sbjct 1350586 TGCCACGGCTCCAAGTAGATGGCGAAAGCACC---GGGTCGCTTGTTGCCGCCCTGGTCG 1350530 Query 81391 ACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCG 81450 ||||| ||||| || ||| || ||||||||||| || |||| |||| ||| || Sbjct 1350529 ACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATTTGATGTCCCA 1350470 Query 81451 TTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGC 81508 || || || | ||| || || | || || | | || ||||| ||||||||| Sbjct 1350469 TTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTGA--GACCGATGC 1350412 Query 81509 CACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGC 81568 |||| | ||| || ||| ||||| || | || || || || |||||||||| Sbjct 1350411 CACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGC 1350352 Query 81569 TATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCAT 81628 |||| | |||||||| | |||||| || |||| |||||| | || ||||||| Sbjct 1350351 TATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCTGAGGTTGTGGTGTTCCGGCAT 1350292 Query 81629 TGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCT 81688 |||| || || || | || ||| |||| | | ||||| |||| || || || Sbjct 1350291 TGAAGAGCGTGGGTGATGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGTCTCAA 1350232 Query 81689 TGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGG 81748 || | |||||| |||||||| || || | ||| |||||||||| ||||| ||| | Sbjct 1350231 TGGCCTTCTCAATATCATCACCGTGGATGCCAACAGCCACACGCATAATCATGTGCTGTG 1350172 Query 81749 G 81749 | Sbjct 1350171 G 1350171 >seq2 Length=3515922 Score = 179 bits (198), Expect = 4e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||||| |||||||| ||||| |||||||||||||| | Sbjct 2794693 AATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAG 2794634 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | || | ||| || ||||| |||||||| || || || || || || Sbjct 2794633 CGATACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGATCA 2794574 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| || ||||| || |||||||| || || | || ||||| | ||||| || Sbjct 2794573 GCAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTACAA 2794514 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| || ||||| ||||| ||||| ||| | |||||||| |||||| Sbjct 2794513 CATCCAGAAAGAATCGACTCTCCATCTCGTCCTCCGTCTTCGTGGTGGA 2794465 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| ||||| || || ||||||||||| || || || ||||| || || Sbjct 2794465 AATGCAGATCTTCGTCAAAACTCTGACCGGCAAGACGATCACACTAGAGGTCGAATCTTC 2794406 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| || | ||| | || || || ||||||||||| || || || ||||| Sbjct 2794405 AGATACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCACCGGACCA 2794346 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| || | || || || || ||||| |||||||| | || || || ||||||| || Sbjct 2794345 GCAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCAGACTACAA 2794286 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || |||||||||||||| ||||| || | | |||||||||||| Sbjct 2794285 CATTCAGAAGGAATCCACTCTCCATCTCGTTCTCAGACTTCGCGGTGGA 2794237 Score = 145 bits (160), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||||||||| || || || ||||||||||| | Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| || || ||||||||||| || |||||||| || ||| Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2794801 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || ||||| || |||||||||| || ||| | ||| || || || Sbjct 2794800 CAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGC-GATTACAA 2794742 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || || | || | ||| | ||||| || |||||| Sbjct 2794741 CATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTCCGAGGTGGA 2794693 Score = 122 bits (134), Expect = 1e-22 Identities = 302/454 (67%), Gaps = 6/454 (1%) Strand=Plus/Minus Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022 || |||||||| ||| | |||||| | ||||| ||||| || || || || || Sbjct 523136 CGTTCCATTCCTTCCGTCGTCGACGGCTTAAAGCCCGGGCAGCGAAAAGTCATGTATGCA 523077 Query 32023 TGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCA 32082 ||| |||| || ||| || || ||||| || || | ||| | |||| |||| Sbjct 523076 TGCTTCAAACGAAATCTGCGGAAGGATATGAAAGTCGCTGAACTGGCAGGCTTGGTGG-- 523019 Query 32083 GAGCAA--ACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTG 32140 | | || || || ||||||||||||||||| || ||||| || ||||| | | | Sbjct 523018 GTGGAATGACCGCTTATCACCACGGCGAGGCTTCTCTCCAACAGACAATTGTTGGCTTGG 522959 Query 32141 CTCAGAACTTT-GTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGG 32199 |||| |||||| ||||| | || ||| | ||| | || |||||||| || || ||||| Sbjct 522958 CTCA-AACTTTCGTCGGATCGAACAACATCAACCTGCTTGAGCCATCAGGCCAATTTGGT 522900 Query 32200 ACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCA 32259 || || | || || | || |||| ||| | ||||| ||||| ||||| || || Sbjct 522899 ACTCGAAACCAGGGAGGTAGTGACTCTGCAAGCGCTCGTTATATCTTTACCCGCCTATCA 522840 Query 32260 CCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGAT 32319 |||| | | ||| | ||| ||| | || || | | |||| ||||||| || Sbjct 522839 CCTTTTGCCAGGAAGCTCTTCCACCAAGCCGATGAGCCTCTTCTCACGTACAATACCGAC 522780 Query 32320 GACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAAC 32379 |||| | |||| || | |||| || || | || ||||| | || ||| Sbjct 522779 GACGACAAAAAAATCGAACCAGAAGTCTATGCGCCAGTCGTCCCCATGATTCTTGTCAAC 522720 Query 32380 GGTGCAGAAGGCATCGGAACGGGGTTCAGTTGCT 32413 ||||| || ||||||||||| || | |||| || Sbjct 522719 GGTGCCGACGGCATCGGAACCGGCTGGAGTTCCT 522686 Score = 120 bits (132), Expect = 3e-22 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||||||||| | || |||||||| ||||| || || || ||| || Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAG--AGC 2794180 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||||| ||| | || | || || || ||||||||||| || || || ||| Sbjct 2794179 TCAGACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGAC 2794120 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | || || || ||||| ||||| || ||||||| || || || | ||||| Sbjct 2794119 CAGCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTAC 2794060 Query 27583 AATGTCCAAAAGGA 27596 || | || ||||| Sbjct 2794059 AACATTCAGAAGGA 2794046 >seq5 Length=2445035 Score = 102 bits (112), Expect = 9e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || || ||||| || || || | || Sbjct 1847681 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAAT 1847740 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | || | || || || ||||||||||| || || || ||||||||||| || Sbjct 1847741 CGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACT 1847800 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || || || ||||||||||| || | ||||| | ||| ||||| ||| | |||| Sbjct 1847801 GATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGC-GACTACAATATTCAAA 1847859 Query 27593 AGG 27595 ||| Sbjct 1847860 AGG 1847862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310293066800