Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 129 4e-25 >seq2 Length=3515922 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || | || ||||||||| | ||||||||||| |||||||| || || || Sbjct 2794010 CCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 2794069 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || ||||| || || || || || || | | ||| ||||| || || Sbjct 2794070 AGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGG 2794129 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| |||| ||| || | ||| |||||| |||||| || Sbjct 2794130 ATGCCCTCCTTGTCTTGGATC-TTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGAC 2794188 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| || || || || || || ||||| || ||||| Sbjct 2794189 TTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236 Score = 102 bits (112), Expect = 5e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 |||||||||| ||||| |||||||| || ||||| || ||||| |||| || || || Sbjct 2794261 ATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGGCCGTCCTCGAGCTG 2794320 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || || || || |||||||| || | |||||||||||| |||| | Sbjct 2794321 CTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATC-T 2794379 Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | | || ||| | ||| || ||| || || || | || ||||| || |||| Sbjct 2794380 TCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGTGTGATCGTCTTGCCGG 2794439 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | | ||||| || || |||||||| Sbjct 2794440 TCAGAGTTTTGACGAAGATCTGCAT 2794464 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | ||||||||| || || || ||||| || || || Sbjct 2794466 CCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAG 2794525 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||||||||| || |||||||| || | ||| || || ||||| || Sbjct 2794526 AGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGG 2794585 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||||||| ||| || | || ||| | || || || ||| ||| | Sbjct 2794586 ATGCCTTCCTTGTCT-TGAATCTTGCTCTTGACGTTGTCGATGGTATCGCTCG-ACTCAA 2794643 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || || || || || | || ||||||||||| ||||| Sbjct 2794644 CCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729542463495