Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 4e-25
>seq2
Length=3515922
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || | || ||||||||| | ||||||||||| |||||||| || || ||
Sbjct 2794010 CCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 2794069
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | || ||||| || || || || || || | | ||| ||||| || ||
Sbjct 2794070 AGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGG 2794129
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||| |||| ||| || | ||| |||||| |||||| ||
Sbjct 2794130 ATGCCCTCCTTGTCTTGGATC-TTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGAC 2794188
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || ||||| || || || || || || ||||| || |||||
Sbjct 2794189 TTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236
Score = 102 bits (112), Expect = 5e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562
|||||||||| ||||| |||||||| || ||||| || ||||| |||| || || ||
Sbjct 2794261 ATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAGAGAGTTCGGCCGTCCTCGAGCTG 2794320
Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
|| ||||| || || || || || |||||||| || | |||||||||||| |||| |
Sbjct 2794321 CTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATC-T 2794379
Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| | || ||| | ||| || ||| || || || | || ||||| || ||||
Sbjct 2794380 TCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGTGTGATCGTCTTGCCGG 2794439
Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706
| | ||||| || || ||||||||
Sbjct 2794440 TCAGAGTTTTGACGAAGATCTGCAT 2794464
Score = 84.2 bits (92), Expect = 1e-11
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | ||||||||| || || || ||||| || || ||
Sbjct 2794466 CCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAG 2794525
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||||||||| || |||||||| || | ||| || || ||||| ||
Sbjct 2794526 AGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGG 2794585
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657
| || ||||||||| ||| || | || ||| | || || || ||| ||| |
Sbjct 2794586 ATGCCTTCCTTGTCT-TGAATCTTGCTCTTGACGTTGTCGATGGTATCGCTCG-ACTCAA 2794643
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || || || || || | || ||||||||||| |||||
Sbjct 2794644 CCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729542463495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |