Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 6e-24
>seq2
Length=3515922
Score = 125 bits (138), Expect = 6e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045
|||||||||| || || || ||| ||||||||||| | || || || || || || ||
Sbjct 2794922 CCATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGA 2794863
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
|||| | || || | ||||| || || || ||||| |||||||| || || ||||
Sbjct 2794862 GCGACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATC 2794803
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| ||||| | || | |||||| ||||| | || || | ||| | ||||||||
Sbjct 2794802 AGCAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACA 2794743
Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||| || |||||||||||||| || ||||| | ||| | || ||||| ||
Sbjct 2794742 ACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTCCGAGGTGGAAT 2794691
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| |||| |||||| | ||||| || ||||| || ||
Sbjct 2794236 ATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTCA 2794177
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| ||| || |||||||| || ||||| |||||||| ||
Sbjct 2794176 GACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCAG 2794117
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
||| | | || | ||| ||||| || | || || | ||| || | ||||| |||||
Sbjct 2794116 CAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGC-CGAACGCTGTCCGACTACAA 2794058
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|||||| |||||| ||||| ||||||||
Sbjct 2794057 CATTCAGAAGGAGAGCACCTTGCATTTGGT 2794028
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || |||||||||||||||||| | || || || || || ||| | ||
Sbjct 2794464 ATGCAGATCTTCGTCAAAACTCTGACCGGCAAGACGATCACACTAGAGGTCGAATCTTCA 2794405
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||| | ||||| || || |||||||| || ||||| ||||| || ||
Sbjct 2794404 GATACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 2794345
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | ||||||||| || | || ||| | || | || || ||||||
Sbjct 2794344 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCAGACTACAAC 2794285
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
||||| ||||| || || | ||| | |||
Sbjct 2794284 ATTCAGAAGGAATCCACTCTCCATCTCGTT 2794255
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||||| || |||||| | ||||| ||||| || || || |
Sbjct 2794692 ATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAGC 2794633
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | ||||| || ||||||||||| |||||||| || || |||||
Sbjct 2794632 GATACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGATCAG 2794573
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | ||||| || ||| | |||||| | ||| | ||||| ||||||
Sbjct 2794572 CAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTACAAC 2794513
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || || ||||| | ||| | || | ||| | || ||||| ||
Sbjct 2794512 ATCCAGAAAGAATCGACTCTCCATCTCGTCCTCCGTCTTCGTGGTGGAAT 2794463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918318452800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |