Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq2 154 3e-32
seq8 132 1e-25
>seq2
Length=3515922
Score = 154 bits (170), Expect = 3e-32
Identities = 166/216 (77%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961
||||| | ||| | || ||||| || |||||||| ||||| | ||||| | | |||||
Sbjct 2794709 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGG-TGCGGCCATC 2794767
Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||| || || |||||||| ||||| || || |||||||||| |||||||||||
Sbjct 2794768 CTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTC 2794827
Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGAT 211078
||||||||| || || || ||||||||||| ||| ||||||||||| |||||
Sbjct 2794828 CTGGATCTTGCTCTTGACATTGTCGATGGTGTC---GCTCGACTCAACCTCGAGGGTGAT 2794884
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | ||||||
Sbjct 2794885 GGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|||||||| || || || || |||||||| || || || ||||| || || | || ||
Sbjct 2794244 CGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAGAGAGTT 2794303
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || ||||||||||| |||||||| | ||||| ||||| || || | ||
Sbjct 2794304 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCC 2794363
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||| |||||||| || ||||| || || || || || ||| ||||| ||
Sbjct 2794364 TCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGT 2794423
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||||||||| || || ||||| || || || | |||||||
Sbjct 2794424 GTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465
Score = 141 bits (156), Expect = 2e-28
Identities = 165/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| || || | || | ||| ||| || || ||||| || || | || ||
Sbjct 2794015 ACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGT 2794074
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| |||||||| || | || ||||| || || | ||
Sbjct 2794075 TCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCC 2794134
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| ||||||||| ||| || || || |||||||| ||||| || || || ||
Sbjct 2794135 CTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCCAG 2794194
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| |||||||| ||||| | |||||| ||||| | ||||||
Sbjct 2794195 CGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Score = 138 bits (152), Expect = 3e-27
Identities = 167/226 (74%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| || || ||||| || ||||| |||||||| || || | |||||
Sbjct 2794471 ACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGT 2794530
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || ||||| || ||||| || || ||||| || ||||| || || || || | ||
Sbjct 2794531 GCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCC 2794590
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069
||||||||| || ||||| || ||||| |||||||| || ||| ||||||||
Sbjct 2794591 TTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTATC---GCTCGACTCAACCTC 2794647
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || ||||| || || |||||||| ||||| | ||||||
Sbjct 2794648 AAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
>seq8
Length=1658097
Score = 132 bits (146), Expect = 1e-25
Identities = 201/282 (71%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCT---GCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|| |||||||| ||||||||||| || ||| |||||| ||||| ||| ||||
Sbjct 1350934 CCCAAGTTCTTCTGGTTGCTCTTCCTATTGCA---GGCATCCTTGTAGAGCATGTAGGG- 1350879
Query 178145 ATTCCCAC-CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGT 178203
| ||||| ||||| |||||| | ||||| || ||| |||| |||||| ||| ||
Sbjct 1350878 AGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCACAGCTTCTGGGCCTTGACGGT 1350819
Query 178204 CTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATA 178263
|| | | || || || || || | | ||||||||||| ||| || |||||
Sbjct 1350818 CTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGCTCCTGGAACTCGTCGCCATA 1350759
Query 178264 GACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTT 178323
|||||| | ||||| |||||||||| |||||||| ||| |||||| || | ||
Sbjct 1350758 GACATCGGCCAGACCTGGAGCCTCATGAGGGCAGAAAAGAGTCCACTCCTGGTTCTTCTC 1350699
Query 178324 CACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| || | |||||| | ||||| |||||| || ||||||||
Sbjct 1350698 GACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAA 1350657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151777225475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |