Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 3e-15
>seq2
Length=3515922
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||||||| | |||||||| || || || || || |||| || ||||| | || ||
Sbjct 2794027 CACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATCCTC 2794086
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
|||||| ||||| || || || || | ||||||||||| || | || ||| |||||
Sbjct 2794087 AAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTG 2794146
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACT 39251
||| || ||||| | | | || || ||| ||| || |||| ||| || |
Sbjct 2794147 GATCTTTGATTTGACATTGTCAATGGTGTCTGAGCT---CTCGACTTCCAGCGTAATCGT 2794203
Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| ||||||| || || ||||||||||||||
Sbjct 2794204 CTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
||||| || || || || |||| || || || |||| ||||| || || || |||||
Sbjct 2794502 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAG 2794561
Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213
|| ||||| ||||| || | ||| | || || ||||| || || |||| |||
Sbjct 2794562 ATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGA-CGTT 2794620
Query 39214 GCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | | |||||||||||||| || || | ||| || | || || || || || || ||
Sbjct 2794621 GTCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCAC 2794680
Query 39273 AAAGATTTGCAT 39284
||| ||||||||
Sbjct 2794681 AAAAATTTGCAT 2794692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545521473695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |