Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=3515922 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||||||| | |||||||| || || || || || |||| || ||||| | || || Sbjct 2794027 CACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATCCTC 2794086 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| ||||| || || || || | ||||||||||| || | || ||| ||||| Sbjct 2794087 AAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTG 2794146 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACT 39251 ||| || ||||| | | | || || ||| ||| || |||| ||| || | Sbjct 2794147 GATCTTTGATTTGACATTGTCAATGGTGTCTGAGCT---CTCGACTTCCAGCGTAATCGT 2794203 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||||| || || |||||||||||||| Sbjct 2794204 CTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 ||||| || || || || |||| || || || |||| ||||| || || || ||||| Sbjct 2794502 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAG 2794561 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || ||||| ||||| || | ||| | || || ||||| || || |||| ||| Sbjct 2794562 ATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGA-CGTT 2794620 Query 39214 GCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | ||| || | || || || || || || || Sbjct 2794621 GTCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCAC 2794680 Query 39273 AAAGATTTGCAT 39284 ||| |||||||| Sbjct 2794681 AAAAATTTGCAT 2794692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545521473695