Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 2e-15
seq5 93.3 3e-14
>seq2
Length=3515922
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || || || ||||| ||||| ||||| || |
Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | ||||| ||||| | || || |||||
Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGA-TCCAGGACAAGGAAGGCATTCCTCCTGATCA 2794802
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || ||||| ||||| || || || | ||||| || ||||||||||
Sbjct 2794801 GCAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACAA 2794742
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| || || ||||| || || || || ||
Sbjct 2794741 CATCCAGAAGGAGTCGACCTTGCACTTGGT 2794712
>seq5
Length=2445035
Score = 93.3 bits (102), Expect = 3e-14
Identities = 130/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679
||||| || ||||||||||| || || ||||| ||||| || || ||| | ||||| |
Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741
Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738
|| ||| | ||| | || || ||||| || || | || || || || ||||| |
Sbjct 1847742 GACAATGTCAAATC-CAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACT 1847800
Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798
|| || |||||||| ||||| ||||||| || || || |||| ||||| || |||||
Sbjct 1847801 GATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAAA 1847860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009538207620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |