Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 1e-15
>seq1
Length=4142182
Score = 98.7 bits (108), Expect = 1e-15
Identities = 214/320 (67%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
||||||||||| || | ||| ||||| | | || | ||| || ||||| ||||||
Sbjct 2622337 CATGCAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGA 2622278
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|| ||||| || || | |||||||| || |||| || || ||||| || |||||
Sbjct 2622277 CCTGGCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAGAAG 2622218
Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GT 48317
|| || || ||||| || || || |||| | || || ||| || || |
Sbjct 2622217 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAG 2622158
Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377
||||| | | ||||| || ||||||||| || || || || || || |||||||
Sbjct 2622157 ATCCATCTAAGAGCCCAGTCGGCCTTCTTCCGTATGCAGGGGATGGTGTCGATAGCATCG 2622098
Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATT 48437
|| || | | || || ||| ||| || ||||| || || || | || |||||
Sbjct 2622097 AACAGGTATGTCTTCTCTTTGGGATCCTTCACGTATGTGTCGATGAGGAGTGAGTACATC 2622038
Query 48438 TCGGAGTGAATATTTTCAAT 48457
|| ||||| ||||| || ||
Sbjct 2622037 TCAGAGTGGATATTCTCCAT 2622018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668669749600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |