Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8 219 6e-52 seq1 95.1 2e-14 >seq8 Length=1658097 Score = 219 bits (242), Expect = 6e-52 Identities = 446/650 (69%), Gaps = 18/650 (3%) Strand=Plus/Minus Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657 || || | ||| || | ||||| |||| | |||| || || || |||| | | Sbjct 1350697 ACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACT 1350638 Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717 ||||| || || |||||| | |||| ||||| || | | |||| ||||| || Sbjct 1350637 TCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGGC 1350578 Query 76718 TCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCA 76777 || | || || || | | |||| ||||| || || || ||||| || | || | ||| Sbjct 1350577 TCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCC 1350518 Query 76778 GTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAA 76837 ||||| || |||| | |||||| ||||| | || || ||||| ||||| ||||| | | Sbjct 1350517 GTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGTTCCTGCA 1350458 Query 76838 ATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTT 76895 ||||| ||| ||||||||| | | || || | || || || || || | | Sbjct 1350457 ATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTGAGA--CCGATGCCACCAGCGGTCT 1350400 Query 76896 TAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA 76955 | ||||| | |||||| || | ||||| ||||||||||| || ||||||||| ||| Sbjct 1350399 TGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATCCTTCA 1350340 Query 76956 TGT-TAAGAAGAA--AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATG 77012 ||| | ||||| || || |||| ||| | || ||||| ||||| || | | Sbjct 1350339 TGTCGATCAAGAAGCAAGAG---GACAGCTGAGGTTGTGGTGTTCCGGCATTGAAGAGCG 1350283 Query 77013 TAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTT 77072 | || |||||||||||||| || || | || | || |||||||| ||||| | ||| Sbjct 1350282 TGGGTGATGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGTCTCAATGGC--CTT 1350225 Query 77073 CT--ATATC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTT 77129 || ||||| || | || || || ||||| |||||||| | ||| ||||| ||||||| Sbjct 1350224 CTCAATATCATCACCG-TGGATGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGTT 1350166 Query 77130 CTACAGTCTT-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAA 77188 | | | ||| || ||||||| || ||||||||| || || || || || ||||| Sbjct 1350165 CGGC-GACTTGCTTGCCGATTTTCAGCAGGTATGATTTCTCTAACGTCTTGAAGCCAAAG 1350107 Query 77189 TAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTC 77238 || | ||| |||||||| || || | ||| |||| || |||| ||| Sbjct 1350106 TATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCCGAGTTCAGTTCGTC 1350057 >seq1 Length=4142182 Score = 95.1 bits (104), Expect = 2e-14 Identities = 237/354 (67%), Gaps = 17/354 (5%) Strand=Plus/Minus Query 46521 GACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATC--CGATA---TT 46575 ||| || || ||||| || || ||||||| |||||||| ||| || || |||| || Sbjct 2622446 GACAGGGAGCGCCTCAGTTAGGAACTCTTTTTCAATAGCGACTGCTTCGACGATGACCTT 2622387 Query 46576 ATCGATGTTACTGTTTCCTCA--CTTGGTGGATGCATCAAATGTTTAAACATTAAACATG 46633 || ||| || ||| || |||| ||| | | ||||| | | || |||| Sbjct 2622386 CTCAATGAG-CT-TTTGGTCGGGCTTG-----TGCTTGAGATGTTGCAGGAGTAGGCATG 2622334 Query 46634 CAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAG 46693 ||||||| || | || ||||| | | || | ||| || ||||| ||||| || | Sbjct 2622333 CAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCTG 2622274 Query 46694 GCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGC 46753 |||| || || | |||||||| || || | || || ||||| || ||||| || | Sbjct 2622273 GCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAGAAGATAC 2622214 Query 46754 CTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCC 46810 | || || || ||||| || || |||| | || || ||| || |||| | |||| Sbjct 2622213 CCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAGATCC 2622154 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCAT 46864 | || ||||||| || ||||| ||| || || || || || || ||||||| Sbjct 2622153 ATCTAAGAGCCCAGTCGGCCTTCTTCCGTATGCAGGGGATGGTGTCGATAGCAT 2622100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934266324800