Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2 174 3e-38
seq5 138 2e-27
>seq2
Length=3515922
Score = 174 bits (192), Expect = 3e-38
Identities = 178/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || | || |||| ||| || ||||| || || || ||||||||||| |
Sbjct 2794009 ACCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 2794068
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| ||||||||||| || || || || || ||||||| | || ||||| ||
Sbjct 2794069 CAGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGG 2794128
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
|| |||||||||||||||||||||| ||| || | || || ||||| | |||| ||||
Sbjct 2794129 GATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTG-AGCTCTCGA 2794187
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||| || || |||||||| |||||||||||||| || || || ||||||
Sbjct 2794188 CTTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || | || || ||||| | ||| ||| || || ||||||||||| |
Sbjct 2794238 CCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAG 2794297
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || || || ||||| |||||||| ||||| ||||| ||
Sbjct 2794298 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGG 2794357
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||||||||||||||| | || ||| | || || || || |||| ||||||
Sbjct 2794358 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGACC 2794417
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| || ||||||||||| || |||| ||| || ||||| |||||||||
Sbjct 2794418 TCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCATT 2794465
Score = 141 bits (156), Expect = 2e-28
Identities = 172/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AGC 282931
||||| || || || || |||| || || || || || ||||||||||| || |
Sbjct 2794694 CCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTC 2794753
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || ||||| ||||| ||||| | || || || ||| ||
Sbjct 2794754 AAG-GTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGG 2794812
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || |||||||| |||||| ||||| || || | ||||| ||||| | || |
Sbjct 2794813 AATGCCTTCCTTGTCCTGGATC-TTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAA 2794871
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| ||||| ||||| ||||| || ||||||||||| ||||| ||||||||
Sbjct 2794872 CCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
Score = 140 bits (154), Expect = 7e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || || ||||| | || |||||| |||||||||||||| |
Sbjct 2794466 CCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAG 2794525
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||| || || ||||| || ||||||||||||| |||||| || || ||
Sbjct 2794526 AGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGG 2794585
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||||||||| ||| ||||| || ||| | ||||| || || | || ||
Sbjct 2794586 ATGCCTTCCTTGTCTTGAATC-TTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAAC 2794644
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| || || || ||||| || || | |||||| || || || ||||||
Sbjct 2794645 CTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
>seq5
Length=2445035
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
||||| || |||||||| | ||| ||||| || || ||||| || ||||| ||||||
Sbjct 1847860 TTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 1847801
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || || |||||| || || |||||||||||||||||||| | ||| || | |||
Sbjct 1847800 AGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 1847741
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | |||||| ||||| ||||| ||||| ||||| | ||||| |||||
Sbjct 1847740 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1847682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738998829810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |