Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2 114 9e-21
seq5 84.2 2e-11
>seq2
Length=3515922
Score = 114 bits (126), Expect = 9e-21
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|| || ||||||||||| |||| ||| ||| |||| || || ||||| |||||||||
Sbjct 2794502 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAG 2794561
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|||| ||| |||||||| | || | |||||||| || ||||| ||| | |
Sbjct 2794562 ATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTG 2794621
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
| ||||| ||| || || ||||| | |||||| ||||| || || || ||||||||
Sbjct 2794622 TCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACA 2794681
Query 44327 AAGATTTGCAT 44337
|| ||||||||
Sbjct 2794682 AAAATTTGCAT 2794692
Score = 111 bits (122), Expect = 1e-19
Identities = 159/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||| ||||| || | ||||||||||| || |||||||| |||| || ||
Sbjct 2794019 AGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGG 2794078
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || || |||||||| || || ||||||| | |||||| || | || | || |||
Sbjct 2794079 CCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCC 2794138
Query 44240 TTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296
|| || ||||| || || || ||| | |||||||| | | || || |||| |
Sbjct 2794139 TTGTCTTGGATCTT-TGATTTGACATTGT--CAATGGTGTCTGAGCTCTCGACTTCCAGC 2794195
Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||| ||||| | ||||| || |||||||||||
Sbjct 2794196 GTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236
Score = 111 bits (122), Expect = 1e-19
Identities = 170/238 (71%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| |||| || | | |||| ||| | || |||||| |||||||||||
Sbjct 2794687 TTGCATTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTA 2794746
Query 44164 ATCG-GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|||| | || | ||| | || || ||||| || ||||| ||||| | ||||||||||
Sbjct 2794747 ATCGCTCAAGGT-GCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGAT 2794805
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGC 44280
| | ||| | |||||||| ||| ||||| ||| || ||| | |||||||||
Sbjct 2794806 CAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGT--CGATGGTGTCGCT 2794863
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || ||||| | || || ||||| || || | ||||| |||||||| ||||||
Sbjct 2794864 CGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATG 2794921
>seq5
Length=2445035
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/184 (71%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
||||||| || ||||| ||| | || |||| || || ||||| ||||| ||||
Sbjct 1847862 CCTTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 1847803
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | || | || ||||| || ||||| || || |||
Sbjct 1847802 TCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 1847743
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | |||||| ||||| | || || ||||| |||||||||||||| ||
Sbjct 1847742 --CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1847685
Query 44326 GAAG 44329
||||
Sbjct 1847684 GAAG 1847681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990334189255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |