Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 114 9e-21 seq5 84.2 2e-11 >seq2 Length=3515922 Score = 114 bits (126), Expect = 9e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || || ||||||||||| |||| ||| ||| |||| || || ||||| ||||||||| Sbjct 2794502 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAG 2794561 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||| ||| |||||||| | || | |||||||| || ||||| ||| | | Sbjct 2794562 ATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTG 2794621 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||||| ||| || || ||||| | |||||| ||||| || || || |||||||| Sbjct 2794622 TCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACA 2794681 Query 44327 AAGATTTGCAT 44337 || |||||||| Sbjct 2794682 AAAATTTGCAT 2794692 Score = 111 bits (122), Expect = 1e-19 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||| ||||| || | ||||||||||| || |||||||| |||| || || Sbjct 2794019 AGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGG 2794078 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || || |||||||| || || ||||||| | |||||| || | || | || ||| Sbjct 2794079 CCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCC 2794138 Query 44240 TTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 || || ||||| || || || ||| | |||||||| | | || || |||| | Sbjct 2794139 TTGTCTTGGATCTT-TGATTTGACATTGT--CAATGGTGTCTGAGCTCTCGACTTCCAGC 2794195 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| ||||| | ||||| || ||||||||||| Sbjct 2794196 GTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236 Score = 111 bits (122), Expect = 1e-19 Identities = 170/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | | |||| ||| | || |||||| ||||||||||| Sbjct 2794687 TTGCATTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTA 2794746 Query 44164 ATCG-GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 |||| | || | ||| | || || ||||| || ||||| ||||| | |||||||||| Sbjct 2794747 ATCGCTCAAGGT-GCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGAT 2794805 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGC 44280 | | ||| | |||||||| ||| ||||| ||| || ||| | ||||||||| Sbjct 2794806 CAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGT--CGATGGTGTCGCT 2794863 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||| | || || ||||| || || | ||||| |||||||| |||||| Sbjct 2794864 CGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATG 2794921 >seq5 Length=2445035 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 ||||||| || ||||| ||| | || |||| || || ||||| ||||| |||| Sbjct 1847862 CCTTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 1847803 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| |||||||| || | || | || ||||| || ||||| || || ||| Sbjct 1847802 TCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 1847743 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | |||||| ||||| | || || ||||| |||||||||||||| || Sbjct 1847742 --CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1847685 Query 44326 GAAG 44329 |||| Sbjct 1847684 GAAG 1847681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990334189255