Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2 158 3e-33
seq5 138 3e-27
>seq2
Length=3515922
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| |||||||| || || || |||||||| || ||||| ||| |||||
Sbjct 2794461 CAGATCTTCGTCAAAACTCTGACCGGCAAGACGATCACACTAGAGGTCGAATCTTCAGAT 2794402
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||||| || ||||| || || ||||| ||||||||||||
Sbjct 2794401 ACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAGCAA 2794342
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||||||||| || |||||||| || || | ||||| | || || ||| |
Sbjct 2794341 CGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCAGACTACAACATT 2794282
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || ||||| || || ||||| ||| | |||||
Sbjct 2794281 CAGAAGGAATCCACTCTCCATCTCGTTCTCAGACT 2794247
Score = 138 bits (152), Expect = 3e-27
Identities = 159/209 (76%), Gaps = 9/209 (4%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || ||||| || ||| | || || || || |||||||||||||| || |||
Sbjct 2794917 CAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC--- 2794861
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||| || ||||| ||||| |||||||| ||||| || ||||| || |||
Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2794801
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAA 178099
|| || || ||||||||||| ||||||||||| ||||| | || |||| |||||| ||
Sbjct 2794800 CAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCAC-CTTGAGCGATTACAA 2794742
Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTG 178128
| |||| || || || || |||| ||||
Sbjct 2794741 CATCCAGAAGGAGTCGACCTTGCA-CTTG 2794714
Score = 132 bits (146), Expect = 1e-25
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || ||| | || || || ||||| || || || || || |||||||||
Sbjct 2794233 CAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTCAGAC 2794174
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || |||||| |||||| || ||||| || || ||||| || ||||||||
Sbjct 2794173 ACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCAGCAG 2794114
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| |||||||| || || ||||| || ||||| | || || |||| || ||| |
Sbjct 2794113 AGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAACATT 2794054
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || ||||| | || ||||||||
Sbjct 2794053 CAGAAGGAGAGCACCTTGCATTTGGTGCTGAGACTC 2794018
>seq5
Length=2445035
Score = 138 bits (152), Expect = 3e-27
Identities = 120/149 (81%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || || |||||||||||||| ||| ||||||||| |||
Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || |||||| ||||| || ||||| || || ||||| || |||||||| |||||
Sbjct 1847742 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACTG 1847801
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
||||||||||| || || |||||||| ||
Sbjct 1847802 ATCTTCGCCGGCAAGCAACTCGAAGACGG 1847830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730968657910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |