Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 2e-24
seq4 86.0 6e-12
>seq2
Length=3515922
Score = 127 bits (140), Expect = 2e-24
Identities = 169/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || || | | ||||| ||||| |||||||||||||||||||| ||||||||
Sbjct 2794010 CCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 2794069
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || || ||||||||||| ||||| ||||| | ||| ||||| | ||
Sbjct 2794070 AGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGG 2794129
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| || |||||||| | || | |||| || || | | | ||||| ||| |||
Sbjct 2794130 ATGCCCTCCTTGT-CTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCT---CTC 2794185
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||| ||| ||||| || ||||||| ||||| || || || |||||
Sbjct 2794186 GACTTCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236
Score = 123 bits (136), Expect = 2e-23
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || ||||| || || || ||||| ||||| |||||||||
Sbjct 2794466 CCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAG 2794525
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || || ||||| ||||| || ||||| || || || |||| |||
Sbjct 2794526 AGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGGG 2794585
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||||||| | ||| | ||||| | ||| | | | || ||||||||||| |
Sbjct 2794586 ATGCCTTCCTTGT-CTTGA-ATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAA 2794643
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | ||| || || || || || || ||||| || ||||| |||||
Sbjct 2794644 CCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692
Score = 122 bits (134), Expect = 8e-23
Identities = 166/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| |||| || ||||||||| ||||| || |||
Sbjct 2794694 CCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTC 2794753
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || |||||||| || |||||||| || |||||||| || || | |||
Sbjct 2794754 AAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGA 2794813
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || ||||||||| ||| || ||| || | ||| |||||||||||||| |
Sbjct 2794814 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATG--GTGTCGCTCGACTCAA 2794871
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || || |||| ||||| ||||| |||||||||
Sbjct 2794872 CCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATG 2794921
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || | | || ||||| || ||| |||||||||||||| ||||| |||
Sbjct 2794238 CCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGAG 2794297
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| |||||||||||||||||||| |||| || || ||||||| ||
Sbjct 2794298 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGGG 2794357
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| ||| || ||| ||| | | | || || || || ||
Sbjct 2794358 ATGCCCTCCTTGTCTTGGATCTTCGACTT-GACGTTGTCAATCGTATCTGAAGATTCGAC 2794416
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || ||||| || || ||||| || || ||||| ||||||||
Sbjct 2794417 CTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCAT 2794464
>seq4
Length=3044656
Score = 86.0 bits (94), Expect = 6e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || |||| | ||||| || | || ||||||||| | ||| ||||| |
Sbjct 2776734 CCGCCCCGGAGACTGAGGACCAGGTGAATGGTCGACTCCTTCTGGACGTTGTAGTCCAAA 2776675
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||| |||||||||||||| |||||||| || ||||| | ||
Sbjct 2776674 AGCGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGAAGGT 2776615
Query 41756 ACGCTCTCCTTG 41767
| || ||||||
Sbjct 2776614 ATTCTTTCCTTG 2776603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303913318000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |