Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq17 129 7e-25 >seq17 Length=1134567 Score = 129 bits (142), Expect = 7e-25 Identities = 256/377 (68%), Gaps = 4/377 (1%) Strand=Plus/Minus Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAG 145949 |||||||||||| | |||||| ||||| || || ||||| ||| | |||| || Sbjct 752660 GTGGCAGGGCGGTAAGGCCATTTTCTTGAGGTCAGCAGGATTCCATGCGCTAAGGATGAT 752601 Query 145950 CCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCC 146009 |||| | | ||| ||||||||| | || | || ||||||||| || || Sbjct 752600 TCTCCGGTCGTAAGGGCGGTTCTTGATCTTGTCAATGACCTCTGCGAGCTGGTCGACACC 752541 Query 146010 CTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAA 146069 ||||||| ||| ||| | | || |||| | || |||||||||| ||||||||| Sbjct 752540 CTGCCCCGTGTAGTCTACAGAGTGGCCCTTGTACTCTGCTCCGAAGTGCCGCCACTGGAA 752481 Query 146070 CCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAA 146129 ||||| || ||||| |||||||| ||| |||| || || | | | | | Sbjct 752480 GCCGTACACAGGCCCAAGGTCCCCCTCCTCGTGGTGCGTCAAGCCAACGCTATCCAAATA 752421 Query 146130 GTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAG 146187 | || || |||||| ||||||||||||||| ||| | || | |||| ||| | Sbjct 752420 TGCGCGCGAACCGTTGCCGTCCCAGATCTTGATGCCGGCTTCTTG--GAGCGACTTGTAA 752363 Query 146188 TCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTC 146247 | ||||||||| |||||||| ||||||||| | | ||| | | | ||| || | | Sbjct 752362 TGTGTGGACCCCGCAATGAACCATAGCAGCTCTCCCACGACGGCTCGCAGGAAAACGCGC 752303 Query 146248 TTGGTGGTCAGCAGGGG 146264 ||||| || || ||||| Sbjct 752302 TTGGTTGTAAGGAGGGG 752286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075192040720