Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq6 102 2e-16 >seq6 Length=1689814 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| ||||| |||||| || | | || ||||||||||||| |||||| || ||||| Sbjct 1427647 CTGCCCGCCGTTCAAGATCATCGTGCTCGACGAGGCGGACAGCATGACACAAGATGCGCA 1427706 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 |||||| || || || || ||||||||| || | ||||| | || || |||| || Sbjct 1427707 GTCCGCGCTGCGGCGCACCATGGAGACGTACAGCAAGATGACGAGATTCTGTTTGGTATG 1427766 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||| || | ||||||| ||||||||| | | ||| |||||| || |||| Sbjct 1427767 CAACTATGTCACACGCATCATCGACCCGCTGGCGAGTAGATGCAGCAAGTTCCGCTTCA 1427825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763400836224