Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 >seq4 Length=1699079 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | ||| |||| ||| || || || || || || ||||| ||||||| Sbjct 983001 TCCACCACGAAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTATAGTCGGA 982942 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || || |||||||| || ||||| ||| |||| || | ||| || || || Sbjct 982941 AAGCGTGCGACCGTCTTCCAACTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGAGG 982882 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| |||||||| ||| | ||| || | | | ||||| | || |||| Sbjct 982881 GATGCCCTCCTTATCCTGAATCTTAGACTTTACGTTGTCGATCGTGTCGCTGGACTCGAC 982822 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| | |||||||| | || || |||||||||||||| Sbjct 982821 CTCCAATGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAAATTTGCAT 982774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379342992130410