Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 3e-13 >seq9 Length=1465676 Score = 91.5 bits (100), Expect = 3e-13 Identities = 179/263 (68%), Gaps = 4/263 (2%) Strand=Plus/Minus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || || ||| | ||| ||||||||||||||||| | || ||| || || || || Sbjct 1036665 GTTGAGGCCAATTCCGCCAGCAGTCTTGGAGATCAACGCGCAGGTCTTGAGTGTGTCGTA 1036606 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGT 94898 || ||||| ||||| || || | | | | | |||||||| || || | || || | Sbjct 1036605 GATGCCCTCGATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGCGGCGA 1036546 Query 94899 GACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAG 94958 | ||| || || || || || || || || || || || || | | ||||||| Sbjct 1036545 GGGTGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGTGTGAAGTACTTCTGCGACATGTA 1036486 Query 94959 ATCATATGTTTCAATGACAGATTTGATGTCTGATCC--GTGAATGCCGACAGCCACACGC 95016 || ||||| || ||| | | |||||| ||| ||| |||||||| || |||||| Sbjct 1036485 GTCGTATGTCTCGATGGCCTTCTCGATGTC--CTCCATGTGGATGCCGACGGCAACACGC 1036428 Query 95017 ATAATCATGTCCTGAGGGCGCTC 95039 || | ||||| ||| |||||||| Sbjct 1036427 ATGAGCATGTGCTGCGGGCGCTC 1036405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581235968190