Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq14 100 4e-16 >seq14 Length=1191321 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 ||||| ||| || || ||||| ||||| ||||| || | | || | ||||| || Sbjct 900872 AAACAACAAGCAGGCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGA 900813 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 || ||||| |||||||| || ||||||||||| ||||| || ||||| ||||| || || Sbjct 900812 GAATGTGAGACCGGGCATGAGACCACGCTTTTTCAGCCAGAAGATGGACGCGAAGGAACC 900753 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 |||||||| || || || ||||| ||||| Sbjct 900752 ACTGAAGAAGATACCCTCAACGGCAGCGAAGGC 900720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815883747040