Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq17 118 7e-22 >seq17 Length=1134567 Score = 118 bits (130), Expect = 7e-22 Identities = 170/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 25738 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 25797 ||||| || || ||| ||||| ||||||| | | || |||||||||||||||| Sbjct 752554 AGCTGGTCGACACCCTGCCCCGTGTAGTCTACAGAGTGGCCCTTGTACTCTGCTCCGAAG 752495 Query 25798 TACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCC 25857 | || ||||||||| |||||||| || || ||||| || || || |||| ||||| Sbjct 752494 TGCCGCCACTGGAAGCCGTACACAGGCCCAAGGTCCCCCTCCTCGTGGTGCGTCAAGCCA 752435 Query 25858 CTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT--TACCCCCTTCTCGG 25915 |||||||| | | | ||||| ||| ||||||||||||| | || ||||| | Sbjct 752434 ACGCTATCCAAATATGCGCGCGAACCGTTGCCGTCCCAGATCTTGATGCCGGCTTCTTG- 752376 Query 25916 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973 |||| ||| | | ||||||||| | |||||| |||||||| || |||||| Sbjct 752375 -GAGCGACTTGTAATGTGTGGACCCCGCAATGAACCATAGCAGCTCTCCCACGACGGC 752319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136696296914