Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 >seq4 Length=1699079 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||||| || || ||||| || | |||||| ||| | || || || || Sbjct 982983 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTATAGTCG--GAAAGCGTGCGACCGTCT 982926 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||| ||| || ||| ||||||| | | |||||| || ||||| || || || || || Sbjct 982925 TCCAACTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGAGGGATGCCCTCCTTATCC 982866 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGG 94973 | ||| || | ||| ||| | ||| ||||| || ||| ||||| || | ||||||| Sbjct 982865 TGAATCTTAGACTTTACGTTGTCGATCGTGTC-GC-TGGACTCGACCTCCAATGTGATGG 982808 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || || || ||||| || ||||| Sbjct 982807 TCTTGCCGGTGAGGGTCTTGACAAAAATTTGCAT 982774 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | || |||||||| || | || || || | ||||| || |||| Sbjct 982755 CACCAAGTGGAGTGTGGATTCCTTCTGAATATTGTAGTCCG--AGAGTGTGCGACCATCC 982698 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || ||||| || || | ||||| | | ||||||||| || || || ||||| ||||| Sbjct 982697 TCTAGCTGCTTACCAGCGAAGATAAGGCGTTGCTGATCAGGGGGGATGCCTTCCTTGTCC 982638 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| || |||||| | ||| |||||| | || || |||| ||||| || Sbjct 982637 TGAATCTTGCTCTTGACATTGTCGATAGTGTCGGATGACTCCACCTCAAGGGTGATCGTC 982578 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || ||||||||||| Sbjct 982577 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 982546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289978406480