Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4 104 2e-17 >seq4 Length=1699079 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||||| |||||||| || ||||| ||||||| | || |||| Sbjct 982985 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGACCGTCT 982926 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || ||||| ||| | || || || || ||||| ||| | |||||| || || Sbjct 982925 TCCAACTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGAGGGATGCCCTCCTTATCC 982866 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | ||| || | | | | ||||||| || ||| |||| |||||||| Sbjct 982865 TGAATCTTAGACTTTACGTTGTCGATCGTGTCGCTGGACTCGACCTCCAATGTGATGGTC 982806 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||||||||| ||||| Sbjct 982805 TTGCCGGTGAGGGTCTTGACAAAAATTTGCAT 982774 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | |||||| ||||||||||| || ||||||||||||| | Sbjct 982544 CCACCGCGCAGGCGCAGGACGAGATGCAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAC 982485 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | ||| ||||| || |||| || ||||| || || ||| Sbjct 982484 AAGGTACGGCCATCCTCAAGTTGCTTGCCAGCGAAAATCAGACGCTGCTGATCTGGAGGG 982425 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | | ||| || | | | | || ||| || ||| Sbjct 982424 ATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATGGTATCGGAGGACTCGACC 982365 Query 16889 TCCACGGTGATGGTTTTTCCGGTCA 16913 || | |||||||| || ||||||| Sbjct 982364 TCGAGAGTGATGGTCTTGCCGGTCA 982340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086923731820